|
Name : PBPRA3479 (PBPRA3479) Accession : YP_131552.1 Strain : Genome accession: NC_006370 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3930921 - 3932153 bp Length : 1233 bp Strand : - Note : - DNA sequence : ATGGCTGCATTTGAATATAAGGCGCTAGACGCAAAAGGTCGTCAGAAAAAAGGTGTTCTTGAAGGCGATCATGCTCGTCA GGTTAGGCAGCAACTACGCGAAAAAGGATTGATGCCAGTTGAAGTTGTGCAAACAGAAACGCGTAGTTCAGCCCAAAAAA TGGGGGCGAGTAGTACTAAATTTCAATTTCGTCGTGGGATCAGCACCAATGAATTATCGCTTGTCACACGCCAATTAGCC ACATTGGTTCAAGCGGGTATGCCGCTTGAAGAATGTTTAAAAGCAGTAGGTGAACAAAACGAAAAGCCACGGTTACGTAA TATGCTATTAGCCGTACGTTCTCGGGTTGTTGAAGGGTATACCTTGTCAGACAGTATGGCGGAATATCCTCATATTTTTG ATCAGCTCTTTCGTGCCATGGTGGCAGCCGGTGAGAAGTCGGGTCACTTAGATACCGTCTTAAACCGCCTGGCTGATTAC ACTGAAAATCGCCAAAAAATGCGTAGCAAGCTTCAGCAAGCAATGATTTATCCGACCATGCTAACGTTGGTGGCGGTTGC CGTTGTCGCATTTTTGCTGGCAACGGTTGTCCCTAAAATTGTTGATCAGTTTGTCCAGATGGGGCAAAAGCTGCCAACCA TTACCGAAGTATTATTAGCCGCCAGTAACTTTGTGCAAAATTGGGGCATCGTTGTGGTTATCGTGATTATTTCGATTATT GCGTTGATCAAAAGTGCACTAAAGAAGCCTGCATTTAGATTGAAGTGGGATCGCTGGGTATTACACATTCCGGTGATCGG CAAGGTTGCTCGTGGTCTGAATACATCCCGTTTTGCGCGTACTCTTTCGATATGTACATCGAGCGCTATTCCGCTGCTTG ATGGGATGAAAGTCGCTTCAGATGTAATGACCAATACATGGGTAAATAAGCAGATTATTGAGGCATCAGAAAAAGTACGT GAAGGTGCTAGCCTGCGTATCTCGCTTGAACAAACCAAACTGTTCCCGCCTATGATGTTACACATGATAGCCAGTGGTGA ACGAAGTGGTGAGCTAGAGCAAATGTTGACCCGTGCCGCAGATAACCAAGATCGTGATTTTGAATCTTTGGTGAATATGG CACTGGGTGTTTTTGAACCATTATTGATTGTCGCTATGGCTGGCATTGTGATGTTTATTGTCATCGCCACGTTAATGCCG ATTATCGAATTGAATAATATGGTTGGTATGTAG Protein sequence : MAAFEYKALDAKGRQKKGVLEGDHARQVRQQLREKGLMPVEVVQTETRSSAQKMGASSTKFQFRRGISTNELSLVTRQLA TLVQAGMPLEECLKAVGEQNEKPRLRNMLLAVRSRVVEGYTLSDSMAEYPHIFDQLFRAMVAAGEKSGHLDTVLNRLADY TENRQKMRSKLQQAMIYPTMLTLVAVAVVAFLLATVVPKIVDQFVQMGQKLPTITEVLLAASNFVQNWGIVVVIVIISII ALIKSALKKPAFRLKWDRWVLHIPVIGKVARGLNTSRFARTLSICTSSAIPLLDGMKVASDVMTNTWVNKQIIEASEKVR EGASLRISLEQTKLFPPMMLHMIASGERSGELEQMLTRAADNQDRDFESLVNMALGVFEPLLIVAMAGIVMFIVIATLMP IIELNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-97 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-96 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PBPRA3479 | YP_131552.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-91 | 53 |
| PBPRA3479 | YP_131552.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-93 | 50 |
| PBPRA3479 | YP_131552.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-76 | 41 |
