Gene Information

Name : PBPRA3478 (PBPRA3478)
Accession : YP_131551.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : type II secretory pathway, pseudopilin EpsG
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3930464 - 3930931 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence : 
TTGGTATGTAGTTTTTCCTTTGGAGGTTTTTTCATGCAACGCAAACAACGCGGCTTTACGCTGCTAGAGGTTATGGTCGT
TATCGTTATTCTTGGCGTATTAGCCAGTTTAGTGGTACCGAACCTATTAGGTAATAAAGAGAAAGCGGATCAACAAAAAG
CCGTTACCGATATTAGTGCGTTAGAGCAATCATTAGATATGTATAAGTTGGATAACAGTGTTTACCCAACAACAGATCAA
GGTCTAGAAGCATTAGTCTCTATGCCTTCATCGTCACCTGAGCCGCGTAATTACCGTGATGGTGGCTACATTCGCCGTTT
ACCTAACGATCCTTGGGGCTACGAGTACCAATATGTGATGCCGGGTGAACATGGTCCTATTGATATCTTTAGCTTAGGTG
CTGATGGTCAAGAAGGCGGTGAAGGTAATAATACTGATATTGGCAACTGGAACATGCTGGACTTTTAA

Protein sequence : 
MVCSFSFGGFFMQRKQRGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAVTDISALEQSLDMYKLDNSVYPTTDQ
GLEALVSMPSSSPEPRNYRDGGYIRRLPNDPWGYEYQYVMPGEHGPIDIFSLGADGQEGGEGNNTDIGNWNMLDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-48 70
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 8e-48 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA3478 YP_131551.1 type II secretory pathway, pseudopilin EpsG VFG2050 Protein 2e-48 70
PBPRA3478 YP_131551.1 type II secretory pathway, pseudopilin EpsG VFG0180 Protein 2e-38 56
PBPRA3478 YP_131551.1 type II secretory pathway, pseudopilin EpsG VFG1871 Protein 4e-35 55