|
Name : PBPRA3250 (PBPRA3250) Accession : YP_131358.1 Strain : Genome accession: NC_006370 Putative virulence/resistance : Virulence Product : sugar phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 3684977 - 3685948 bp Length : 972 bp Strand : + Note : - DNA sequence : ATGTCAGAGAAGTTTGATTTTTGCGCCCATGGCCGTAAAGTTTTAGAAATTGAAATTGCTGCATTACAGCAGATATCCCA ATACATTAATGGCTGTTTTACTCAGGCTTGTGAGCTCATTTTAAGTAGTCACGGCAAAGTCATCGTCATGGGAATGGGTA AATCGGGTCATATCGGCAATAAGATCGCCGCAACCCTGGCAAGTACTGGCACCCCTTCTTTCTTCGTTCATCCGGGTGAA GCCAGTCATGGTGATCTTGGTATGATTGAAAAAGGGGATGTCGTTCTAGCAATCTCAAACTCTGGCGAAGCCAGTGAAAT TTTATCACTACTGCCCGTAATAAAACGCCTTGGTATTCCATTGATCAGCGTAACGGGCAAACCAGAATCAAGCATGGCAA AGTTCTCGCAAGTCCATTTGCAGATCACTGTTGCTGCAGAGGCTTGTCCGCTGAATCTGGCACCTACATCAAGTACAACG GCAACCTTAGCAATGGGGGATGCCTTGGCTATTGCACTAATGGAAGCGCGTGGTTTTACTGCTAATGATTTTGCGTTATC GCACCCTGGTGGTGCTTTAGGCCGTAAATTGCTGCTATGTATTGCAGATGTTATGCACACTGGCGACTTGCTTCCTATTA TTGATGAAGCAGCCACCATTAAAGACGCCCTACTTGAAGTCTCACGTAAAGGCTTAGGCATGACGGCAGTGGTCAATAGT GAGCAGCAACTCACGGGTATTTTCACTGATGGTGATTTACGTCGCTTACTGGATAAGCGCGTGGACATTCATAATACCGC GATTGGTGATGTGATGGGGCGCAACCCATCAACCATTGAGGCAAATGTGTTAGCAGCAGAAGGCTTAAAATTGATGGAAG ATAACAAGATCAATGGACTGCTTATCACTGAAAATGGCCAGTTAGTGGGTGCTTTAAATATGCATGATTTATTGAAAGCC GGAGTAATGTAA Protein sequence : MSEKFDFCAHGRKVLEIEIAALQQISQYINGCFTQACELILSSHGKVIVMGMGKSGHIGNKIAATLASTGTPSFFVHPGE ASHGDLGMIEKGDVVLAISNSGEASEILSLLPVIKRLGIPLISVTGKPESSMAKFSQVHLQITVAAEACPLNLAPTSSTT ATLAMGDALAIALMEARGFTANDFALSHPGGALGRKLLLCIADVMHTGDLLPIIDEAATIKDALLEVSRKGLGMTAVVNS EQQLTGIFTDGDLRRLLDKRVDIHNTAIGDVMGRNPSTIEANVLAAEGLKLMEDNKINGLLITENGQLVGALNMHDLLKA GVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 8e-52 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-52 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-51 | 45 |
