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Name : PBPRA3201 (PBPRA3201) Accession : YP_131309.1 Strain : Genome accession: NC_006370 Putative virulence/resistance : Virulence Product : type IV pilin assembly protein PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3636660 - 3638297 bp Length : 1638 bp Strand : + Note : - DNA sequence : TTGGTGCAAGAGCAAAACGTGGTCGATACCGTTCATGCAGAAGGCATTAACGTGCCTTCTGCGTTAACGCGTTTGGGCAT ATTCAGCGACAGTGAACTTGCTCGCCATATCGAACTCATTTTTGCCATCGCGCTGATTGATATTCACCAGTACGATTACG CAGAGTGCTGTAAAAAAGTCTATCAACGTGAATTGGTATTGCGCCATCGGGCAATTCCGCTGCAATTTAACGATACCAGC CTATTTCTGGGCATTAGCGACCCCACTAACTTAGATGCACAAGACGAGTTTCGTTTTGCTACCGGCAAAAATGTTGAACT GCTGCTGTTAGACAATAAGCAGCTAGAAAGCGCTATTCGACGCATTTACGGCAGTGACGTCGGTGAAACCGAACACGCGC GCGATATCAGTAACCAAGATTTAAACAACTTGGTCGATATTAGCGAAGGGGAAATTGACGACACCACAGATTTGAGCCGA GACAGCGCCCCCGTTACCCGCTATATCAACCAAATATTGCTAGAGGCAGTACGTAAAAAAGCCTCTGACATTCATTTTGA ACCCTATGAAGAAAGCTACCGGATCCGTTTTCGCTGCGATGGTATTTTGCATCAACATGCTACCCCACCCACGACGTTAT CGCGCCGCTTATCGACCCGTTTAAAGGTAATGTCGAAGCTCAATATTGCCGAGCGCCGTAAACCTCAAGATGGGCGTATT AAGCTGAAATTAACCCCAACGCTAGCGATTGATCTGCGAGTATCATCGCTGCCAACGTTATGGGGTGAAAAGGTGGTACT GCGGATCCTTGATAGCTCAGCCGCCAGTTTAGACATTGATATTCTGGGTTATAACGACAAACAAAAGCACGACTACCTTG CCGCATTAGCACAACCACAAGGCATGATCTTAATGACCGGGCCAACAGGCAGCGGTAAAACCGTTTCGCTATATACCGGG CTGAAAATTCTTAATACCGAAGAGCTCAATATTTCCACCGCTGAAGATCCGGTCGAGATCAACCTGCCGGGCATTAACCA AGTTCATATCAATACCCAAGTTGGGCTCAACTTTTCTGATGCGCTACGATCGTTTCTTCGCCAAGATCCAGATGTGGTGA TGGTCGGTGAAATACGAGACATAGAAACCGCAGCAATTGCAGTAAAAGCCGCCCAAACTGGTCACTTGTTACTCTCGACC TTGCATACCAATTCTGCCGCCGAAACCATTACGCGTTTAACCAATATGGGCATTGAAGATTTTAACCTCGCGTCGTCACT CAGTTTAATCATCGCCCAGCGTTTAGCACGGCGCTTATGCCCGTACTGTAAAGAAGTACATGATCTTGATGTCCTCACCA GAGACAAATTTGAGATACCAGCAGACAGCCTAATTTATAAAGCCAGCGAACGAGGCTGTGATGATTGCAATAAAGGCTAT CTAGGGCGGGTTGGCATCTATGAAGTCATGCCATTTAGCCCAGAACTCGCCCAAGCACTCGTCGCGGGCGCATCGACCCT AGAGCTTGAACGTATTGCCTGCCAGCAAGGTATGCAGCGATTACAACAATCTGGCATAGAAAAATTAATGGCGGGCACCA CCAGCTTAATCGAACTACAGCGAATACTGCATTACTGA Protein sequence : MVQEQNVVDTVHAEGINVPSALTRLGIFSDSELARHIELIFAIALIDIHQYDYAECCKKVYQRELVLRHRAIPLQFNDTS LFLGISDPTNLDAQDEFRFATGKNVELLLLDNKQLESAIRRIYGSDVGETEHARDISNQDLNNLVDISEGEIDDTTDLSR DSAPVTRYINQILLEAVRKKASDIHFEPYEESYRIRFRCDGILHQHATPPTTLSRRLSTRLKVMSKLNIAERRKPQDGRI KLKLTPTLAIDLRVSSLPTLWGEKVVLRILDSSAASLDIDILGYNDKQKHDYLAALAQPQGMILMTGPTGSGKTVSLYTG LKILNTEELNISTAEDPVEINLPGINQVHINTQVGLNFSDALRSFLRQDPDVVMVGEIRDIETAAIAVKAAQTGHLLLST LHTNSAAETITRLTNMGIEDFNLASSLSLIIAQRLARRLCPYCKEVHDLDVLTRDKFEIPADSLIYKASERGCDDCNKGY LGRVGIYEVMPFSPELAQALVAGASTLELERIACQQGMQRLQQSGIEKLMAGTTSLIELQRILHY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-78 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-78 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG0112 | Protein | 3e-129 | 52 |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG1880 | Protein | 2e-119 | 51 |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG2426 | Protein | 3e-85 | 49 |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG2048 | Protein | 2e-79 | 49 |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG0233 | Protein | 2e-99 | 46 |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG1876 | Protein | 6e-75 | 46 |
| PBPRA3201 | YP_131309.1 | type IV pilin assembly protein PilB | VFG0182 | Protein | 1e-77 | 44 |
