Gene Information

Name : PBPRA2287 (PBPRA2287)
Accession : YP_130475.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : -
Position : 2633155 - 2634051 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAAGCTTACTGGCTTGATTGCTGCACCTCACACGCCATTTGATGCTAAAGGTAATGTTAACCTACCGATCATTGA
TAAAATTGCAGAGCACTTGATCAAAGATGGCGTCAATGGTGTTTATATTTGCGGTACAACCGGTGAAGGTATTCACTGTT
CTGTAGAAGAACGCAAAGCAATCGCAGAGCGTTGGGCTGAAGTATCTCAAGGGCGTTTAAAAATTACCGTCCATACTGGC
GCATTGAGTATTATTGATACGCTTGAATTAACTCGCCATGCCGACACTCTTGATATTTTTGCTACTTCAGCCATTGGTCC
ATGCTTCTTCAAACCAGGTAGTGTTGACGATCTTGTCGATTACTGTGCTGCCGTTGCTGCTGCTGCACCATCAAAAGGTT
TCTACTACTACCATTCAGGTATGTCTGGTGTAAATCTGGATATGGAGCAGTTCTTAATCAAAGCGGAAAACCGTATTCCA
AACCTATACGGCTTAAAGTTTAACAGCGGTGATTTATACGAATACCAACGTTGCCTTCGTGCCTGCGATGGAAAATTTGA
TATTCCATTTGGCGTTGATGAATTCTTACCTGGCGCACTCGCTGTAGGTGCTATTGGCGCGGTAGGCAGCACGTACAACT
ATGCCGCTCCGCACTTTAATCAAATCATTGAAGATTTTCATAACGGCAAACATGCTGACGTTATTACAGGCATGGACAAT
GTTATTTCACTCATTCGAGTGCTAGTTGAATATGGTGGCGTAGCAGCGGGTAAAGCAGCAATGGCATTACATGATATTGA
TGCAGGTGATCCTCGCCTTCCACTAAAAGCCTTAACGCTTGAACAAAAACAAGATGTAATCAATAAAATGCGCGACGCAG
ACTTTATTAAGCGCTAA

Protein sequence : 
MEKLTGLIAAPHTPFDAKGNVNLPIIDKIAEHLIKDGVNGVYICGTTGEGIHCSVEERKAIAERWAEVSQGRLKITVHTG
ALSIIDTLELTRHADTLDIFATSAIGPCFFKPGSVDDLVDYCAAVAAAAPSKGFYYYHSGMSGVNLDMEQFLIKAENRIP
NLYGLKFNSGDLYEYQRCLRACDGKFDIPFGVDEFLPGALAVGAIGAVGSTYNYAAPHFNQIIEDFHNGKHADVITGMDN
VISLIRVLVEYGGVAAGKAAMALHDIDAGDPRLPLKALTLEQKQDVINKMRDADFIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 3e-103 75
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 3e-103 75
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-103 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA2287 YP_130475.1 N-acetylneuraminate lyase VFG1109 Protein 1e-103 75