Gene Information

Name : PBPRA2281 (PBPRA2281)
Accession : YP_130469.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, periplasmic component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 2626152 - 2627120 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAACATAAATAAAATCACTCTTTCCTTACTAGCTCTGGCACTTACTACTACTGCAGTGCAAGCAGAAACAATACT
TAAAATGGGCTTGCAGGCCAATGTTGGTTCGGTTGAATATGATTCAGCAAAAATACTATCAGACAAAATTTCAGAGCTAA
GTGATGGAGAGATGAAGCTCTTATTATACCCAGGCGCACAGCTTGGCGATGATCGAGCGATGCTACAACAATTAAGCATG
GGTGATCTTGATATAACGTTTGCTGAATTTGGCAGGATGGGGTTATGGATTCCTCGTGCTGAAGCCGTGATGTTACCTTA
CGTCGTGAAAAATTACGCGCATATTCAACGTATTTTTAATTCTAAATTTGGTCAAGGTGTGCGTGAAGAAATGTTAACCA
ATTTCAATTGGCGAGCATTAGATACTTGGTATAACGGTACGCGACAAACCTCTTCAAATCGCCCTTTAAACACTATTTCT
GATTTTGAGGGATTAAAGCTACGAGTGCCAAATGCTAAAGCAAACTTGGCTTTTGCGAAATATGCAGGTGCATCACCAAC
ACCAATGGTATTCTCAGAAGTTTACTTAGCGTTGCAAACCAATGCCGTTGATGGTCAGGAAAATCCGCTACCTACATTTA
ATACCATGAAGTTTTATGAGGTACAGCCAAACTTGGCAATGACCAATCATATTGTAAATGATCAAATGGTGTTAATCAGT
GAAGATCGTTGGCAGAGTCTAAGTAAAGATCAGCAAGCAACTATCACTGAAGCAGTCAGTGTTGCAGGTAAACGACATAC
GAACTTTGTAAACAATCAAGAGAAAGAACTGATTACATTCTTTAAAGCGGAAGGGGTAAATATTACATACCCTGATCTAG
CACCTTTCCGAGAAGCAATGCTGCCAATTTATAAAGACTTTGATAAGAAAATAGGCAAGCAGTTAGTTGAAGAGCTAAGC
GATATTTAA

Protein sequence : 
MNNINKITLSLLALALTTTAVQAETILKMGLQANVGSVEYDSAKILSDKISELSDGEMKLLLYPGAQLGDDRAMLQQLSM
GDLDITFAEFGRMGLWIPRAEAVMLPYVVKNYAHIQRIFNSKFGQGVREEMLTNFNWRALDTWYNGTRQTSSNRPLNTIS
DFEGLKLRVPNAKANLAFAKYAGASPTPMVFSEVYLALQTNAVDGQENPLPTFNTMKFYEVQPNLAMTNHIVNDQMVLIS
EDRWQSLSKDQQATITEAVSVAGKRHTNFVNNQEKELITFFKAEGVNITYPDLAPFREAMLPIYKDFDKKIGKQLVEELS
DI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 2e-111 70
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 2e-111 70
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 5e-112 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA2281 YP_130469.1 TRAP-type C4-dicarboxylate transport system, periplasmic component VFG1112 Protein 8e-112 70