Gene Information

Name : PBPRA2280 (PBPRA2280)
Accession : YP_130468.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, small permease component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3090
EC number : -
Position : 2625545 - 2626057 bp
Length : 513 bp
Strand : -
Note : -

DNA sequence :
ATGTTTCGTAAGATCATTGATAATATTGAAGAAATAATCACTGTTCCTCTTATGATTGCTCTACTGTGTATTCTAACTTG
GCAAATATCCTCTCGTTGGTTGTTTGACTCTCCGTCATTGTGGAGTGAGGAGCTTGCACGAGTCCTTTTTTTGCATATGG
CAATCATTGGGGGAGCAATAGCCATTAAGAAAGATGACCATGTAAAAATCACTTTTTTTTCTGACAAACTGCCGCGGAAT
TTTCGTTATAGCCTACTGTTTGCTTTAGAGTTATTGGTGCTGATTACGATTGTTGCGATGATCTATTATGGATACGCACA
TGTTCAACGTACCGCTTTTTTCGAATTAATTACGCTTGGTATCTCTAGCTCTTGGATGACTTATGCATTGCCTGTTGGCG
GATGCTTTATGTTAGTGAGGCAATGCCAAAAACTGTATTTTGTATTAATTGATTGGCGTATCAATGAAAATAAAAATACA
TCCCATCTTACTGCCTGTGACATTAATGAATAA

Protein sequence :
MFRKIIDNIEEIITVPLMIALLCILTWQISSRWLFDSPSLWSEELARVLFLHMAIIGGAIAIKKDDHVKITFFSDKLPRN
FRYSLLFALELLVLITIVAMIYYGYAHVQRTAFFELITLGISSSWMTYALPVGGCFMLVRQCQKLYFVLIDWRINENKNT
SHLTACDINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1778 NP_231413.1 hypothetical protein Not tested VPI-2 Protein 9e-37 68
VC0395_A1376 YP_001217319.1 hypothetical protein Not tested VPI-2 Protein 9e-37 68
VPI2_0026c ACA01843.1 TRAP-type C4-dicarboxylate transport system small permease component Not tested VPI-2 Protein 6e-37 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA2280 YP_130468.1 TRAP-type C4-dicarboxylate transport system, small permease component VFG1111 Protein 2e-37 68