Gene Information

Name : PBPRA2279 (PBPRA2279)
Accession : YP_130467.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, large permease component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 2624252 - 2625535 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTACATCCATAGTGGGCTGGCTAGGGCTTCTTTTCGCAGGTATGCCAGTAGGGTTCTCTTTAATATTTGTTGGTCT
TGCTTTTTTAGTCTTAACAGAAAGTACCGGAATAAATTTTGCCGCTCAGCAAATGATTGGAGGCTTGGATAATTTCACAT
TGCTTGCGGTACCATTTTTTGTATTAACTGGGCACCTAATGAATAGTGCCGGTATTACAGAACGTATTTTTAATTTTGCT
AAAGCAATGGTAGGACATATAACGGGTAGTTTAGGCCACGTAAATATTCTGGCGAGTTTGTTGTTTTCTGGTATGTCGGG
ATCGGCATTGGCTGATGCTGGTGGTCTTGGTCAGCTTGAAATCAAATCGATGAGAGATGCGAAATATGATGATGACTTTG
CTGGTGGCTTAACCGCGGCATCCTGTATTATTGGCCCCTTAGTACCACCATCGATTCCTCTTGTTATTTATGGTGTTGTG
TCTAACACCTCAATTGGTGCGTTATTTCTTGCTGGTGCAATACCGGGATTATTATGTTGTATTGCCTTGTGTATCATGAC
GTATTTTATCGCGAAGAAACGTGGTTATATGACGTTACCTCGTGCATCGAGAAAAGAAAGATTAATCGCATTTAGAGATG
CATTTTTATCTTTATTAACGCCGTTCATTATTATAGGTGGTATTTTTTCTGGTAAATTCACCCCCACTGAAGCGGCTATT
ATCTCGTCGTTATATGCACTTTTTCTAGGTACTGTTGTATACAAATCTTTAACAATGGACAAGTTTATTAAACTTGTTCA
AGAAACGGTAACAACGACATCTGTTGTCGCTTTAATGGTGATGGGAGTTACTGTATTTGGCTGGATAGTTGCTCGTGAAC
AATTACCACAGCAGTTAGCAGAGCTCTTTTTATCGATCAGTGATAATCCTTTGATTTTATTGCTACTCATTAATCTGTTG
TTACTTTTTTTGGGTACCTTTATTGAATCGCTAGCGTTGTTATTATTACTTGTACCGTTTCTAGTACCCGTTGCTACATC
CGTTGGTATTGACCCTGTTCATTTTGGTGTTATGGCTATCCTTAACTTAATGATCGGTATATTAACGCCACCAATGGGAA
TGGCTCTATACGTTGTATCAAAGGTTGGTAATATCCCATTTCATGTATTAACACGTGGTGTTTTACCACTACTAGTACCG
TTATTTATTGTGCTTGGTTTAATTATCGTTTTTCCACAAATCACGCTGTTTTTACCGCAACTTGTACTTGGATATGGGCT
TTAA

Protein sequence : 
MFTSIVGWLGLLFAGMPVGFSLIFVGLAFLVLTESTGINFAAQQMIGGLDNFTLLAVPFFVLTGHLMNSAGITERIFNFA
KAMVGHITGSLGHVNILASLLFSGMSGSALADAGGLGQLEIKSMRDAKYDDDFAGGLTAASCIIGPLVPPSIPLVIYGVV
SNTSIGALFLAGAIPGLLCCIALCIMTYFIAKKRGYMTLPRASRKERLIAFRDAFLSLLTPFIIIGGIFSGKFTPTEAAI
ISSLYALFLGTVVYKSLTMDKFIKLVQETVTTTSVVALMVMGVTVFGWIVAREQLPQQLAELFLSISDNPLILLLLINLL
LLFLGTFIESLALLLLLVPFLVPVATSVGIDPVHFGVMAILNLMIGILTPPMGMALYVVSKVGNIPFHVLTRGVLPLLVP
LFIVLGLIIVFPQITLFLPQLVLGYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 4e-134 87
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 5e-134 87
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 5e-134 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA2279 YP_130467.1 TRAP-type C4-dicarboxylate transport system, large permease component VFG1110 Protein 2e-134 87