Gene Information

Name : PBPRA1565 (PBPRA1565)
Accession : YP_129778.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : iron(III) ABC transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1778250 - 1779035 bp
Length : 786 bp
Strand : -
Note : -

DNA sequence :
ATGTATAAGCTCTCTAATATTCAAATGGTTCGTGGTGGACGTTCGATTCTTGAGGTAGATTCCTTACAGATTCCAACCTC
TGAGTTAACGGTAGTACTTGGTCACAACGGATCAGGTAAGTCGACGCTAGTGAGTTTACTGTCTGGGCAACAAGCACCAG
ATTCAGGCCTAGTGGAACTCAATGGACACAGCCTTACAGGTTACAAAACAAAAGACTTAGCAAAACAAGTGGCTTTTCTG
CCACAAAAATTACCCACTTCCGCCGGACTAACCGTTATAGAGCTCGTCAAGTTGGGGCGTTTCCCATGGCGAGGTACACT
CGGGCGTTGGAACGCAGAAGACAGCCGTATTATTGATGAATCCATTGCTAAAACAGGCGTAGAGGCATTTGCTCATACCT
TAGCCGACGAATTATCAGGTGGTGAACGCCAAAGAGCATGGGTTGCGATGTTATTAGCACAACAGTCCCCTATTTTGATT
CTTGATGAACCAACATCAGCGCTAGATATTCAGCACCAATACCAATTGATGAATCTACTGGCCGAGCTTAACAAAACTCA
ACATGTTGGAGTGATTGTAATTTTACACGATCTGAATTTAGCGCTGCGTTATGCCACTCATATCGTCGCCCTAAAGAATG
GTAAGATCGCATTTGAAGGACGCTCTGACATATTGCTAGACGAACAACGGTTGTCTGATCTTTATGAATCAACAATCAGA
CTGATCGACCATCCCGAGCCATCTAAAGAGAACGGTAATAATAAGGTTGCGATTGTATGTGCTTAA

Protein sequence :
MYKLSNIQMVRGGRSILEVDSLQIPTSELTVVLGHNGSGKSTLVSLLSGQQAPDSGLVELNGHSLTGYKTKDLAKQVAFL
PQKLPTSAGLTVIELVKLGRFPWRGTLGRWNAEDSRIIDESIAKTGVEAFAHTLADELSGGERQRAWVAMLLAQQSPILI
LDEPTSALDIQHQYQLMNLLAELNKTQHVGVIVILHDLNLALRYATHIVALKNGKIAFEGRSDILLDEQRLSDLYESTIR
LIDHPEPSKENGNNKVAIVCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-43 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-43 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-43 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-43 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-44 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA1565 YP_129778.1 iron(III) ABC transporter, ATP-binding protein VFG0925 Protein 6e-40 41