Gene Information

Name : lysS (lpl1741)
Accession : YP_127079.1
Strain : Legionella pneumophila Lens
Genome accession: NC_006369
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1945719 - 1947209 bp
Length : 1491 bp
Strand : -
Note : Highly similar to lysyl-tRNA synthetase

DNA sequence :
ATGAGTGAAGAACATGTACATTTAGATGAAAGTGAAGTTTATCATATTCGCAAACAAAAATTAGCGGAATTGCGCACAAG
CGGGTTTAATTTTCCAAATACCTTTCGCCGCGAACATTTAGCCGATGCTTTGCTGAAGCAATACTCCGAAACTGAGAAAC
AAACATTAGAACAAAAGCATGTGAAAGTATCTGTTGCAGGCCGAATCGTTCTGAGAAGAATTATGGGTAAAGCCAGTTTT
TTTCACATTCAAGATGTATCAGGTCGGATACAAGTTTATCTTCGTTCAAATGATCTTCCTGACGTTTATGAACAGTTTAA
ACATTGGGATTTAGGAGATATTGTTGGTGTACAGGGTGAGTTGTTTAAAACAAACACTGGTGAACTGACCATTAATGCAG
AACATGTTGAGTTATTAACCAAATCTTTAAGGCCGCTTCCTGATAAGTTCCATGGCTTGGCTGATCAGGAATTGAAATAT
CGTAAACGTTATGTTGACTTGATTGCAAATGAAGACAGTCGGAAAACCTTTTTAATACGCTCACATTTAATCAAAGCCTT
CAGAGAGTTTATGGATGATAATCATTTTCTGGAAGTAGAAACACCAATGATGCATCCAATTCCTGGAGGTGCTTTGGCTC
GTCCTTTCGTAACTCATCACAATACATTGGATATGACCATGTATTTGAGGATAGCTCCCGAATTGTACTTAAAACGCTTG
GTTGTTGGTGGTTTTGAGAGAGTATATGAAATTAATAGAAATTTCCGTAATGAAGGAATTTCTACTCGTCATAATCCAGA
GTTCACGATGCTGGAATTTTACCAGGCTTATGCCGATTACAATGATTTGATGAATTTCACTGAACAATTGTTTCATTATC
TATGCGATAAAGTATTAGCTACTCGGCAAATAGAATATCAAGGTCAAGTCATTGATTTCAATAAACCTTTTGAACGGTTG
AGCGTAAAAGAAGCTATATTAAAATATCATCCTGATATTAAGGCGCAGCAGTTAGAAACGGTAGAGGGATGCAGAACACT
TCTGAATGATTTAGATCTGCCTTATAAAGAAACTGATGGCCTGGGTAAACTACAAATTATTCTTTTTGAGGAGACAGTAG
AGCACCAATTATTTCAGCCCACTTTTATTACGGAATACCCTACAGAAATATCTCCTTTAGCGAGACGTTCTGATACCAAT
CCGGAAGTCACCGATCGATTTGAGTTTTTTATTGCTGGTCGTGAGATTGCGAATGGATTTTCTGAATTAAACGATGCAGA
AGATCAAGCTGAGCGCTTTCGAAAGCAAGTTGAAGAAAAGGATGCAGGTGACTTAGAGGCAATGCATTTTGATAGTGATT
ATATTGAAGCATTGGAATATGGCTTGCCGCCTACAGCCGGTGAAGGGATTGGAATCGATCGCTTGGTGATGTTATTTACT
AATTCGCAATCAATCAGAGACGTTATTTTATTTCCGCATTTGAGGCAGTAA

Protein sequence :
MSEEHVHLDESEVYHIRKQKLAELRTSGFNFPNTFRREHLADALLKQYSETEKQTLEQKHVKVSVAGRIVLRRIMGKASF
FHIQDVSGRIQVYLRSNDLPDVYEQFKHWDLGDIVGVQGELFKTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKY
RKRYVDLIANEDSRKTFLIRSHLIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRL
VVGGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATRQIEYQGQVIDFNKPFERL
SVKEAILKYHPDIKAQQLETVEGCRTLLNDLDLPYKETDGLGKLQIILFEETVEHQLFQPTFITEYPTEISPLARRSDTN
PEVTDRFEFFIAGREIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFT
NSQSIRDVILFPHLRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-144 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_127079.1 hypothetical protein VFG1668 Protein 1e-144 60