|
Name : serS (lpp0575) Accession : YP_122913.1 Strain : Legionella pneumophila Paris Genome accession: NC_006368 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 623237 - 624517 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATAATCAATTACTTCGAGAGAATCCTCAATATGTAGCAACCCAATTGCTGAAGCGAGGATTTCAATTTGATGC GGTCACTTTCAGTCAGTTGGAAGAAAAGCGTAAGGCTTTGCAAGTAAGTACGCAATCATTACAGAACGAACGAAATTTGC GTTCGAAAGCCATCGGTGAAGCAAAATCTCGAGGTGAAAATATAGAACCTATGCGCGAAGAAGTGAATAAACTTGGCGCT AAACTGGAGCAACAAAAGACTGAACTGGACGAGATTCTTAAGCAAATTGAGGTAATTAGCCTATCATTACCTAATATCCC TCATGAGTCAGTACCTGTTGGTAAAGATGAATTGGATAATCAGGAAATCAGAAAATGGGGCGACGTACCTGCTTTTTCTT TCCCTGTAAAGTCACATGATGAATTGGGTGAAGCACTAGGGCAAATGGATTTTGCGCTTGCAGCTAAAATTACGGGCAGT CGTTTTGTCGTCATGAAAGGGCATCTGGCCCGATTACATCGGGCTTTAATTCAATTCATGCTGGATATACATATTCAGCA ACATGGTTACCAGGAAATATATGTACCTTATATTGTTAATGCGGATAGCTTACTAGGGACTGGACAGTTACCAAAGTTTG AGGCTGATTTATTTAAATTAACAGGTGATAATGGGTACTACTTGACGTCTACTTCAGAAATTCCAGTGACCAATACAGTA AGGGAAATGATATTGTCCGCTGAGCAATTACCTATTCGTTATGTTTGCCATTCCCCGTGTTTTCGTAGTGAGGCGGGTTC TTATGGCAAAGACACAAAGGGAATGATTAGACAGCATCAATTTGAGAAAGTTGAACTGGTCTGGATTACCAAACCGGAAG ATTCTTATAATGCTTTAGAGCAACTTACTCAGCATGCTGAAGTTATTTTACAGCGTTTGAACTTGCCTTACCGAGTGGTT GCTTTGTGTACCGGGGATATAGGCGCTGGTTCAGCCAAAACCTATGATCTTGAGGTTTGGTTGCCTAGCCAGAATACTTA TCGAGAAATATCCTCTTGTTCCAATATGGAGGCATTTCAGGCACGCCGAATGAAAGCGCGTTTCCGCAATCCGGATACTA ATGAGATTCAATTAGTCCACACTCTAAATGGATCAGGTTTAGCTGTTGGACGAACTTTAGTTGCCATTATGGAGAATTAT CAAGATGAGCATGGAAACATTCATATACCGGATGCTTTGAAGCCTTATTTAGGTGGTATTGATATCATCTCTGTGAAATA G Protein sequence : MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGEAKSRGENIEPMREEVNKLGA KLEQQKTELDEILKQIEVISLSLPNIPHESVPVGKDELDNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGS RFVVMKGHLARLHRALIQFMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTNTV REMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNALEQLTQHAEVILQRLNLPYRVV ALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEAFQARRMKARFRNPDTNEIQLVHTLNGSGLAVGRTLVAIMENY QDEHGNIHIPDALKPYLGGIDIISVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-100 | 51 |
