|
Name : rph (lpp1994) Accession : YP_124308.1 Strain : Legionella pneumophila Paris Genome accession: NC_006368 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 2256150 - 2256857 bp Length : 708 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGTCCCAGTAATCGTGAACATGATCAACTTCGTCCCGTTACAATAACACGTAATTTTACCAATTATGCCGAAGGCTC TGTATTAGTCGAATTTGGTCAGACAAAAGTGATTTGTAACGCATCAATCGTCGAAGGAGTTCCCCGGTTTTTAAAAGGTA AAAACCAAGGGTGGATAACAGCTGAATATGGCATGCTCCCACGTGCAACTCATAGCCGTACCGAAAGAGAAGCCAGTAAA GGTAAGCAAGGCGGTAGAACATTGGAAATTCAACGTCTCATAGGGCGCTCATTGAGAGCATGTATCGATTTAAAGGTATT GGGCGAAAATACTATTACTCTTGATTGTGATGTTATTCAAGCGGATGGGGGAACCAGAACAGCAGCTATAACTGGCAGCT GTGTGGCTATGCGAGATGCCATTCACTGGATGGTTCAACGTGAAAAAATAAAGAAGATGCCTGCTTTTAATTATGTAGCT GCCGTATCTGTAGGCATTTACAGGGGTCAACCCGTGCTGGATTTGGATTATGCAGAAGATGTTCTTGCTGAAACAGATAT GAATGTGGTTATGAATGAACAAGGACATTTTATTGAAGTTCAAGGCACTGCTGAAGATAACTCCTTTAACCGAGAACAAC TGAACAGCATGTTGTCATTAGCTGAAATTGGTATTCCTCAATTGATTGAAATCCAAAAAAATGCCTGA Protein sequence : MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWITAEYGMLPRATHSRTEREASK GKQGGRTLEIQRLIGRSLRACIDLKVLGENTITLDCDVIQADGGTRTAAITGSCVAMRDAIHWMVQREKIKKMPAFNYVA AVSVGIYRGQPVLDLDYAEDVLAETDMNVVMNEQGHFIEVQGTAEDNSFNREQLNSMLSLAEIGIPQLIEIQKNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 4e-60 | 57 |
