Gene Information

Name : rph (lpp1994)
Accession : YP_124308.1
Strain : Legionella pneumophila Paris
Genome accession: NC_006368
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 2256150 - 2256857 bp
Length : 708 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCCAGTAATCGTGAACATGATCAACTTCGTCCCGTTACAATAACACGTAATTTTACCAATTATGCCGAAGGCTC
TGTATTAGTCGAATTTGGTCAGACAAAAGTGATTTGTAACGCATCAATCGTCGAAGGAGTTCCCCGGTTTTTAAAAGGTA
AAAACCAAGGGTGGATAACAGCTGAATATGGCATGCTCCCACGTGCAACTCATAGCCGTACCGAAAGAGAAGCCAGTAAA
GGTAAGCAAGGCGGTAGAACATTGGAAATTCAACGTCTCATAGGGCGCTCATTGAGAGCATGTATCGATTTAAAGGTATT
GGGCGAAAATACTATTACTCTTGATTGTGATGTTATTCAAGCGGATGGGGGAACCAGAACAGCAGCTATAACTGGCAGCT
GTGTGGCTATGCGAGATGCCATTCACTGGATGGTTCAACGTGAAAAAATAAAGAAGATGCCTGCTTTTAATTATGTAGCT
GCCGTATCTGTAGGCATTTACAGGGGTCAACCCGTGCTGGATTTGGATTATGCAGAAGATGTTCTTGCTGAAACAGATAT
GAATGTGGTTATGAATGAACAAGGACATTTTATTGAAGTTCAAGGCACTGCTGAAGATAACTCCTTTAACCGAGAACAAC
TGAACAGCATGTTGTCATTAGCTGAAATTGGTATTCCTCAATTGATTGAAATCCAAAAAAATGCCTGA

Protein sequence :
MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWITAEYGMLPRATHSRTEREASK
GKQGGRTLEIQRLIGRSLRACIDLKVLGENTITLDCDVIQADGGTRTAAITGSCVAMRDAIHWMVQREKIKKMPAFNYVA
AVSVGIYRGQPVLDLDYAEDVLAETDMNVVMNEQGHFIEVQGTAEDNSFNREQLNSMLSLAEIGIPQLIEIQKNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-60 57