|
Name : mutS (lpp1768) Accession : YP_124086.1 Strain : Legionella pneumophila Paris Genome accession: NC_006368 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1989757 - 1992297 bp Length : 2541 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGTCTAGCTCTCACACACCAATGATGCAGCAATATTTGCGCATTAAAACAGACTATCCCGACATGCTCTTATTTTATCG CATGGGTGATTTTTATGAGTTGTTTTTTGATGATGCCAAACGCGCGTCACAACTTTTGGATTTAACTCTGACACATAGAG GACAATCTGCTGACAAACCTATTCCCATGGCCGGCGTTCCTTATCATGCGGTAGAAAACTATTTGGCACGATTATTAAAA AAAGGGGAATCCGTAGCCATCTGTGAACAAATCGGAGATCCAGCTACCAGCAAAGGACCAGTAGAAAGACAAGTAACGCG AATCATTACTCCTGGTACAGTAACAGATGAAGCATTATTAGATGCCAGAAAAGATAATATTTTGTTGGCCATACACACCC AAAAACAAAAAATTGGTATTGCATGGGTTGATTTAGGTGGCGGTCGTTTTCATTTGCAGGAATTAACAGAAGAACATCAG TTAAATGCAGAGTTAGTGCGCCTGCAACCAGCAGAGCTCCTCTGCAAAGAATCCACGCCGCTTCCTTCATTTTGTTCTAA CTTTGCTGTTAAATTCAGACCAGGATGGGAGTTTGATGCAAGCAACGCACATAAATTATTGTGTGAACAATTCTCCGTGA CCGATCTTTCGGCCTTTGGCGAACAAAATTACCCCACTGCCTTGATTGCAGCAGGCGCTTTATTAGCTTATTTAAAAACC ACTCAAAAACAGTCATTACCACATCTTACAACACTTACTCTTGAGCAATCCGAGGATTACCTGCAACTGGACGCATCGAC TCAAAAGCACTTGGAGCTTTTTGAAAATATACATGGTGGTGGTGAGCACTGTTTGCTTTCCATATTAGATAAAACAGCTT GTGCGATGGGAAGCCGTTTACTCAAGCGTTGGCTGGGAAAACCATTAAAACAACATGCAATCATTCAAACAAGACAACAA GCCATTAAGGAAATTATTTTTCTTCAACAAGACGTTTCACTTCATCAGCTGATTAAACAATGCGCCGATGTGGAGCGCAT AGTATCACGTATTGCTTTAAAATCAGCGCGCCCACGTGATTTGGTTTCCTTATTGCAAACTCTGACACTGCTTCCAGCAA TCCATGACGAATTACAAGAAAACAAGAGCTTATTAATCAATGAAATCAAGAAAGAAATAAGCCCTCTCCCACTGCTGCAG CAACTGCTTGAAACAGCCATTATAGACAACCCGCCAATGCTAATTAGGGATGGTGGAGTCATTGCTCCAGGATTTGATGA AGAACTGGATGAGTTGCGTAATTTAAGTAGCAATGCTCATGAAACATTAGTAAAACTTGAACAGGAAGAAAAAAATCGCA CAGGATTATCCACTCTAAAACTAGGTTACAATAGCGTTCAGGGATTTTATATTGAACTGTCAAAGGCACAAGCTCAAAAT GCGCCGCCCCATTTTCACAGAAAGCAAACTTTAAAAAATGTGGAACGTTATATTACTCCCGAACTAAAGCTGTTCGAAGA CAAGGTGCTTTCAGCTCAATCCAAAGCATTGGCTCGCGAAAAATGGCTATATGACAATTTGCTTGAAGAAATTCAGCAAT ACATACCTGAGTTATCGGATCTTGCAAAATCTCTGGCGCAATTGGACGTATTGGTCACTCTTGCTGAAAGAGCACAAAGT TTAAATTGGAATTGCCCGAATCTCGTTCCTGAATCAGGCATTATGATACAAGCCGGACGACATCCTGTCATTGAGCCATT ATTACAAGAACGGTTTATCGCTAATGATTTGGAACTTAAACCAAATCAAAATATGTTACTAATCACTGGGCCCAACATGG GCGGCAAATCGACCTACATGAGGCAAACCGCCTTAATCGTTCTGCTGTCACATATTGGAAGTTTTGTACCTGCTGATGAA GTGACATTAGGCCCATTAGACCGAATCTTTACTCGCATTGGGGCCAGTGATGATTTATCCTCTGGACGTTCCACTTTTAT GGTGGAAATGACTGAGACAGCTCAAATATTAAGGCAGGCAACCAGCCAAAGCCTCGTATTAATCGATGAAATTGGTCGTG GTACCAGTACCTATGATGGAATGGCATTAGCTTACGCAAGCTGTGCCTTTCTTGCGTCAACAATAAAAGCCTATACTTTG TTTTCTACTCATTACCTGGAGTTGACCGAATTACCCAAAGAATTCTCTTGTATTCGCAACGTGCATTTGCAAGCATCCAT CAAGACAGGACAAATTGTTTTCTTGTACCGTGTCGAAGAAGGTTGCGCAAATCGTAGTTACGGATTAGAAGTCGCAGAAT TAGCTGGCATACCTAAAGAAGTGCTAAAGCTGGCTCATGAACATCTGAATCAGATACAAGATACTCAATCTATCCTGGTC CAGACTCAAATTATAAAGCCTCCCACATCTCCAGTTTTAACTGAACTAAAAAAAATTGATCCAGATAGATTAACTGCCAA AGAAGCGTTGGATTTAATTTATAAGTTAAAACACCTGGAGTGTGCCGAGAGCATCAATTGA Protein sequence : MSSSHTPMMQQYLRIKTDYPDMLLFYRMGDFYELFFDDAKRASQLLDLTLTHRGQSADKPIPMAGVPYHAVENYLARLLK KGESVAICEQIGDPATSKGPVERQVTRIITPGTVTDEALLDARKDNILLAIHTQKQKIGIAWVDLGGGRFHLQELTEEHQ LNAELVRLQPAELLCKESTPLPSFCSNFAVKFRPGWEFDASNAHKLLCEQFSVTDLSAFGEQNYPTALIAAGALLAYLKT TQKQSLPHLTTLTLEQSEDYLQLDASTQKHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQ AIKEIIFLQQDVSLHQLIKQCADVERIVSRIALKSARPRDLVSLLQTLTLLPAIHDELQENKSLLINEIKKEISPLPLLQ QLLETAIIDNPPMLIRDGGVIAPGFDEELDELRNLSSNAHETLVKLEQEEKNRTGLSTLKLGYNSVQGFYIELSKAQAQN APPHFHRKQTLKNVERYITPELKLFEDKVLSAQSKALAREKWLYDNLLEEIQQYIPELSDLAKSLAQLDVLVTLAERAQS LNWNCPNLVPESGIMIQAGRHPVIEPLLQERFIANDLELKPNQNMLLITGPNMGGKSTYMRQTALIVLLSHIGSFVPADE VTLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLVLIDEIGRGTSTYDGMALAYASCAFLASTIKAYTL FSTHYLELTELPKEFSCIRNVHLQASIKTGQIVFLYRVEEGCANRSYGLEVAELAGIPKEVLKLAHEHLNQIQDTQSILV QTQIIKPPTSPVLTELKKIDPDRLTAKEALDLIYKLKHLECAESIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_124086.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 54 |
