|
Name : plpp0052 (plpp0052) Accession : YP_122207.1 Strain : Genome accession: NC_006365 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 52521 - 53126 bp Length : 606 bp Strand : + Note : Similar to resolvase TnpR DNA sequence : ATGAAAATAGGATATGCACGTGTTTCGACCAAAGATCAATTATTGTCCATGCAGGTGGAAGCATTAAACGCAGCTGGTTG TGAACAAATTCATAAAGAAATTGCTAGTGGAGCAAAAACTGCAAGGCCTGTTCTTGATGAAATTATAAGAAACCTTCGTG AAGGTGATACATTGGTGATTTGGAAATTAGATAGGCTTGGTAGAAATCTAGCGCATCTAATTCATCTCACAACAAAATTG ATAGAGAAGAAAGTGGGTTTGATTAGTCTCAATGATCCTATTGATACCACTACTGCACAGGGTAGGTTAATTTTCGGGAT TTTTGCATCATTAGCAGAATTTGAACGTGAATTAATCCGCGAGCGGACTCAAGCCGGACTAAAATCTGCCCGCGCTCGCG GGAGGAAAGGAGGCAGACCCAAAGGAATGTCACAGGCTGCTATGGAGAAGGCTGCTATTGCTGAAGCACTTTATAAAAAT GGAACTATTCCTGTTAAGAAAATTGCTGAACAGTTGGATATTTCTAAAACAACTTTATATCTATACTTACGGTCTCGAAA TGTTTGTATAGGAGAAAAAATTGACGCTCTGATTATTAGGGATTAA Protein sequence : MKIGYARVSTKDQLLSMQVEALNAAGCEQIHKEIASGAKTARPVLDEIIRNLREGDTLVIWKLDRLGRNLAHLIHLTTKL IEKKVGLISLNDPIDTTTAQGRLIFGIFASLAEFERELIRERTQAGLKSARARGRKGGRPKGMSQAAMEKAAIAEALYKN GTIPVKKIAEQLDISKTTLYLYLRSRNVCIGEKIDALIIRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 3e-34 | 53 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 3e-34 | 53 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 6e-29 | 51 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 3e-29 | 51 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 3e-29 | 51 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 2e-28 | 49 |
