Gene Information

Name : plpp0021 (plpp0021)
Accession : YP_122176.1
Strain :
Genome accession: NC_006365
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 17755 - 18549 bp
Length : 795 bp
Strand : +
Note : similar to plasmid DNA replication protein

DNA sequence :
ATGAATATTCAACATGAGCGTATTTTATCACTATGTGAACGCTTGAATTTATCAGCGATAGCGACAAATTACTCTTATTT
AGCTCAAGAGGCAGCAACTCATAATCAAGGATTTAGTGATTTTTTAGAAAATGTATTGACTGTGGAGTTACAGGAAAAAC
AGTATCGAAGTCGAACCCTGCTCACTAAAATGGCTGGTTTTCCAATGATTAAAACAATAGATGATTTTGATTTTAAATTT
GCTTCTGGTGTACCAAAAAATAAAATCCGAGAACTGACTTCTTTGGCTTTCATTGAACGACAGGAAAATATTTTATTACT
TGGTCCTAGTGGATTAGGCAAGACTCATTTAGCGATTGCTCTGGGTTATTTAGCAGTTCAAGCAAACATTAAAACAAAAT
TTATTAGCGCAGCAGATTTGATGTTATTGCTTGAAACAGCTCATCGCCAAGGGCGATATAAAGATATTATGCGACGGGTT
ATTAATAATGCTCGACTGCTCATTATTGATGAAATTGGATATTTACCAATGAACCGAGATCAGGCAAATCATTTCTTCCA
AGTTATTGCAAATCGCTATGAAAAAGGTTCTATTATTGCCACCTCCAATCTCGCTTTTGGTCAATGGGACAATACTTTCG
CCGGCGATAAAGTATTAACAGCGGCTATGCTCGACAGGTTGCTCCATCATGCTCATGTCATTCAATGCAGAGGCGACAGT
TATAGATTAAAAGACAAATTTAAGGCCGGTTTAATTCAAAATCAGAAGGAGGAGCAAAATAATATAACTGATTAA

Protein sequence :
MNIQHERILSLCERLNLSAIATNYSYLAQEAATHNQGFSDFLENVLTVELQEKQYRSRTLLTKMAGFPMIKTIDDFDFKF
ASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIALGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRV
INNARLLIIDEIGYLPMNRDQANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
YRLKDKFKAGLIQNQKEEQNNITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-60 62
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 6e-74 54
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-74 54
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 6e-74 54
unnamed CAA21402.1 - Not tested HPI Protein 7e-74 54
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 6e-74 54
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 6e-74 54
api84 CAF28558.1 putative transposase Not tested YAPI Protein 6e-74 54
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-74 54
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 4e-73 54
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-74 54
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-74 54
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-73 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
plpp0021 YP_122176.1 transposase/IS protein VFG1460 Protein 1e-60 62
plpp0021 YP_122176.1 transposase/IS protein VFG1515 Protein 3e-74 54
plpp0021 YP_122176.1 transposase/IS protein VFG1627 Protein 3e-74 54
plpp0021 YP_122176.1 transposase/IS protein VFG1606 Protein 3e-74 54
plpp0021 YP_122176.1 transposase/IS protein VFG1663 Protein 2e-73 54