Gene Information

Name : pnf2460 (pnf2460)
Accession : YP_122095.1
Strain :
Genome accession: NC_006363
Putative virulence/resistance : Virulence
Product : putative resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 47853 - 48404 bp
Length : 552 bp
Strand : +
Note : -

DNA sequence :
GTGCGCGTCGGCTACATCAGGGTCTCGACCGTCGACCAGAACACCGACCGACAACTCGACGGCATCGACGTCGAGCGCGT
CTTCACCGACAAGGTCACCGGCAAGAACGCCAAACGGCCCGCCCTCCAGGAGATGCTCGCCTTCGTCCGCGACGGCGACA
CCGTGCTCGTGCACTCCATGGACCGCCTCGCCCGCAACCTCGACGACCTCCGACGCCTCGTCCGACAGCTCACCGGCAAA
GGCGTACGCGTCGAGTTCGTCAAAGAGGCACTGACCTTCACCGGCGAGGACTCCCCCATGGCCACCCTGATGCTGTCGGT
CATGGGCGCCTTCGCCGAATTCGAACGCGCCCTGATCCTGGAACGCCAGCGCGAAGGCATCGCCACGGCGAAGGCCCGCG
GCGCCTACAAGGGCCGAAAGCCCGCACTCACCGCCGACCAGGTGACGGCGCTGCGCGAGCGCGCGGCAGCCGGCGAGCCG
AAATCCGCCCTCGCGAGAGAGTTCGGAGTCAGCCGCGAAACCGTCTACGCCTACCTTCGCGCCACTGCCTGA

Protein sequence :
MRVGYIRVSTVDQNTDRQLDGIDVERVFTDKVTGKNAKRPALQEMLAFVRDGDTVLVHSMDRLARNLDDLRRLVRQLTGK
GVRVEFVKEALTFTGEDSPMATLMLSVMGAFAEFERALILERQREGIATAKARGAYKGRKPALTADQVTALRERAAAGEP
KSALAREFGVSRETVYAYLRATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 1e-55 73
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-54 69
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-54 69
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-54 69
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-53 69
res YP_005124341.1 DNA-invertase Not tested Not named Protein 3e-22 53
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 6e-22 41
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 6e-10 41
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 6e-10 41
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 6e-10 41
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 6e-10 41
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 9e-10 41
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 9e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pnf2460 YP_122095.1 putative resolvase VFG1030 Protein 9e-55 69