Gene Information

Name : pnf2250 (pnf2250)
Accession : YP_122074.1
Strain :
Genome accession: NC_006363
Putative virulence/resistance : Resistance
Product : putative arsenic resistance transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 25012 - 26121 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGTGAACACCACCGACCAACCCGCCGTGGTCGCCAAACTGTCCACCCTCGACCGGTTCCTGCCCGTCTGGATCGG
CGTGGCCATGGCCGCCGGCCTGCTGCTCGGACGCATGATCCCCGGCCTGGGCGACGGGCTGTCGGCGGTGGAGATCGACG
GCATCAGCCTGCCGATCGCGATCGGGCTGCTGATCATGATGTACCCGGTGCTGGCCAAGGTCCGCTACGACCGCCTCGAC
ACCGTCACCGGCGACCGCAAACTCCTGCTCAGCTCCCTGCTGCTGAACTGGATCCTCGGCCCGGCTCTGATGTTCGCCCT
GGCCTGGCTGCTGCTGCCGGACCTGCCCGAGTACCGCACCGGGCTGATCATCGTCGGCCTTGCCCGCTGCATCGCCATGG
TCATCATCTGGAACGACCTCGCCTGCGGCGACCGCGAAGCCGCCGCCGTGCTGGTCGCGCTGAACTCGGTTTTCCAGGTG
ATCATGTTCGCCGGACTCGGCTGGTTCTACCTCTCGGTCCTGCCCGGCTGGCTCGGCCTGGAACAAACCACGATCGACAC
CTCGCCGTGGCAGATCGCGAAATCGGTGCTGATCTTCCTCGGCATCCCGCTGCTGGCCGGGTACCTCACCCGCCGCTTCG
GTGAACGCGCCAAGGGCCGTACCTGGTACGAATCGGCCTTCCTGCCCAAGATCGGGCCCTGGGCCCTGTACGGGCTGCTG
TTCACCATCGTGATCCTGTTCGCCCTGCAAGGCGACCAGATCACCTCCCATCCTCTCGATGTCGTGCGGATCGCGATCCC
CCTGTTGGCCTACTTCGCCATCATGTGGGGCGGCGGCTACGCCCTCGGCGCGGTCCTGGGTCTGGGCTACGAGCGCACCA
CCACCCTGGCGTTCACCGCCGCGGGCAACAACTTCGAGCTCGCCATCGCCGTCGCCATCGCCACCTACGGCGCCACCTCC
GGCCAGGCCCTCGCCGGGGTCGTCGGCCCGCTCATCGAGGTCCCCGTCCTGGTCGGACTGGTCTACGTCTCGCTCGCGCT
GCGCAAACGCTTCCCCGCCACCATCTCCCCGGCGGCGTCGTCGGGCACCGGGGAGATGGCGCCGCGATGA

Protein sequence :
MSVNTTDQPAVVAKLSTLDRFLPVWIGVAMAAGLLLGRMIPGLGDGLSAVEIDGISLPIAIGLLIMMYPVLAKVRYDRLD
TVTGDRKLLLSSLLLNWILGPALMFALAWLLLPDLPEYRTGLIIVGLARCIAMVIIWNDLACGDREAAAVLVALNSVFQV
IMFAGLGWFYLSVLPGWLGLEQTTIDTSPWQIAKSVLIFLGIPLLAGYLTRRFGERAKGRTWYESAFLPKIGPWALYGLL
FTIVILFALQGDQITSHPLDVVRIAIPLLAYFAIMWGGGYALGAVLGLGYERTTTLAFTAAGNNFELAIAVAIATYGATS
GQALAGVVGPLIEVPVLVGLVYVSLALRKRFPATISPAASSGTGEMAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-63 53
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 4e-77 52
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 3e-77 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pnf2250 YP_122074.1 putative arsenic resistance transporter BAC0573 Protein 8e-79 53
pnf2250 YP_122074.1 putative arsenic resistance transporter BAC0004 Protein 3e-62 45