Gene Information

Name : deoA (nfa9510)
Accession : YP_117160.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 1052167 - 1053450 bp
Length : 1284 bp
Strand : +
Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate

DNA sequence :
GTGACGGCTCTGGACGCGGTTTCCCTCATCACCACCAAACGCGACGGCGGACAGCTCTCCGACGAGCAGATCGACTGGGT
GATCGACGCCTTCACCCGGGGCGCGGTCGCCGACGAACAGATGGCGGCGCTGGCGATGGCGATCCTGCTGCGCGGGATGA
CCAGGCGCGAGACCGCCCGCTGGACCGCCGCCATGATCGCCTCCGGGCAGCGCATGGACTTCACCGACCTGCCCCGGCCC
ACCGTCGACAAGCACTCCACCGGCGGCGTCGGCGACAAGATCACCCTGCCGCTGGCGCCACTGGTCGCCGCCTGCGGCGC
GGCGGTGCCGCAGCTGTCCGGCCGCGGGCTCGGGCACACCGGCGGCACCCTGGACAAACTCGAGTCGATCCCGGGCTGGC
GGGCCGACGTCCCGGTGGCGCGGATGCGCGAGATCCTGGCCGACCCGGCGATCGGTGCGGTGATCTGCGCGGCCGGCGCC
GACCTCGCTCCCGCCGACAAGCGCCTCTACGCACTGCGCGACGTCACCGGCACCGTCGAGTCGGTGCCGCTGATCGCCAG
TTCGATCATGAGCAAGAAGATCGCCGAGGGCACCGCCGCGCTGGTCCTCGACGTCAAGGTCGGCTCCGGCGCGTTCATGA
AGGACCGCGCGACCGCGACCGAATTGGCCACCACGATGGTCGAGCTCGGCGCCGACGCGGGCGTGCGGACGGTGGCCTTG
CTGACCGCGATGGACAGCCCGCTCGGCCGCACGGCGGGCAATGCGCTCGAGGTCGCCGAGGCGGTCGCGGTCCTGGCCGG
TGGCGGCCCCGCCGACGTCGTCGAGCTGACCCTGGCACTGGCGCGCGAGATGGTCGCCCTCGCCGGCCTGGACACCGATC
CGGCCGACGTGCTCGCCTCCGGCCGCGCGATGGACCACTGGCGCGCGATGGTGCGCGCCCAGGGCGGCGACCCGGACGCG
CCGCTGCCGCGCGCCACCCACACCGAGATCCTGCGCGCCGACCGTGACGGCGTACTGACCCGCCTCGACGCGATGGGCGT
CGGTGTGGCCGCCTGGCGGCTCGGCGCGGGGCGGGCACGCCAGGGCGACCCGGTGCAGCACGGCGCGGGCGTGGCACTGC
ATGCCGGGGTCGGCGACCGCGTCACCGCTGGCCAGGCGCTGTGCACCCTGCACACCGACACCCCCGAGGCGTTCGACTCC
GCGGCCGCCGCGCTGCGCGAGGGGATCGAGATCGGCGACGCCGCCGCCGGCACGGGCCCGCTCGTGCTCGACCGGATCGG
TTGA

Protein sequence :
MTALDAVSLITTKRDGGQLSDEQIDWVIDAFTRGAVADEQMAALAMAILLRGMTRRETARWTAAMIASGQRMDFTDLPRP
TVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKLESIPGWRADVPVARMREILADPAIGAVICAAGA
DLAPADKRLYALRDVTGTVESVPLIASSIMSKKIAEGTAALVLDVKVGSGAFMKDRATATELATTMVELGADAGVRTVAL
LTAMDSPLGRTAGNALEVAEAVAVLAGGGPADVVELTLALAREMVALAGLDTDPADVLASGRAMDHWRAMVRAQGGDPDA
PLPRATHTEILRADRDGVLTRLDAMGVGVAAWRLGAGRARQGDPVQHGAGVALHAGVGDRVTAGQALCTLHTDTPEAFDS
AAAALREGIEIGDAAAGTGPLVLDRIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 3e-113 64