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Name : deoA (nfa9510) Accession : YP_117160.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 1052167 - 1053450 bp Length : 1284 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : GTGACGGCTCTGGACGCGGTTTCCCTCATCACCACCAAACGCGACGGCGGACAGCTCTCCGACGAGCAGATCGACTGGGT GATCGACGCCTTCACCCGGGGCGCGGTCGCCGACGAACAGATGGCGGCGCTGGCGATGGCGATCCTGCTGCGCGGGATGA CCAGGCGCGAGACCGCCCGCTGGACCGCCGCCATGATCGCCTCCGGGCAGCGCATGGACTTCACCGACCTGCCCCGGCCC ACCGTCGACAAGCACTCCACCGGCGGCGTCGGCGACAAGATCACCCTGCCGCTGGCGCCACTGGTCGCCGCCTGCGGCGC GGCGGTGCCGCAGCTGTCCGGCCGCGGGCTCGGGCACACCGGCGGCACCCTGGACAAACTCGAGTCGATCCCGGGCTGGC GGGCCGACGTCCCGGTGGCGCGGATGCGCGAGATCCTGGCCGACCCGGCGATCGGTGCGGTGATCTGCGCGGCCGGCGCC GACCTCGCTCCCGCCGACAAGCGCCTCTACGCACTGCGCGACGTCACCGGCACCGTCGAGTCGGTGCCGCTGATCGCCAG TTCGATCATGAGCAAGAAGATCGCCGAGGGCACCGCCGCGCTGGTCCTCGACGTCAAGGTCGGCTCCGGCGCGTTCATGA AGGACCGCGCGACCGCGACCGAATTGGCCACCACGATGGTCGAGCTCGGCGCCGACGCGGGCGTGCGGACGGTGGCCTTG CTGACCGCGATGGACAGCCCGCTCGGCCGCACGGCGGGCAATGCGCTCGAGGTCGCCGAGGCGGTCGCGGTCCTGGCCGG TGGCGGCCCCGCCGACGTCGTCGAGCTGACCCTGGCACTGGCGCGCGAGATGGTCGCCCTCGCCGGCCTGGACACCGATC CGGCCGACGTGCTCGCCTCCGGCCGCGCGATGGACCACTGGCGCGCGATGGTGCGCGCCCAGGGCGGCGACCCGGACGCG CCGCTGCCGCGCGCCACCCACACCGAGATCCTGCGCGCCGACCGTGACGGCGTACTGACCCGCCTCGACGCGATGGGCGT CGGTGTGGCCGCCTGGCGGCTCGGCGCGGGGCGGGCACGCCAGGGCGACCCGGTGCAGCACGGCGCGGGCGTGGCACTGC ATGCCGGGGTCGGCGACCGCGTCACCGCTGGCCAGGCGCTGTGCACCCTGCACACCGACACCCCCGAGGCGTTCGACTCC GCGGCCGCCGCGCTGCGCGAGGGGATCGAGATCGGCGACGCCGCCGCCGGCACGGGCCCGCTCGTGCTCGACCGGATCGG TTGA Protein sequence : MTALDAVSLITTKRDGGQLSDEQIDWVIDAFTRGAVADEQMAALAMAILLRGMTRRETARWTAAMIASGQRMDFTDLPRP TVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKLESIPGWRADVPVARMREILADPAIGAVICAAGA DLAPADKRLYALRDVTGTVESVPLIASSIMSKKIAEGTAALVLDVKVGSGAFMKDRATATELATTMVELGADAGVRTVAL LTAMDSPLGRTAGNALEVAEAVAVLAGGGPADVVELTLALAREMVALAGLDTDPADVLASGRAMDHWRAMVRAQGGDPDA PLPRATHTEILRADRDGVLTRLDAMGVGVAAWRLGAGRARQGDPVQHGAGVALHAGVGDRVTAGQALCTLHTDTPEAFDS AAAALREGIEIGDAAAGTGPLVLDRIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-113 | 64 |
