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Name : katC (nfa55390) Accession : YP_121755.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 5868086 - 5869747 bp Length : 1662 bp Strand : - Note : - DNA sequence : ATGACCGATGTCGCGTCGCAGGGCGCTGCCCAGGGAGACGACCGCCGCGTCCTGACCAACAGGCAGGGACATCCTGTCTT CGACAACCAGAACCAGCGCACGGTGGGTGCCCGTGGACCCGCGACTCTGGAGAACTACCAGTTCTTGGAGAAGATCAGCC ATTTCGATCGGGAACGCATCCCCGAGCGTGTCGTGCACGCCCGCGGGGCCGTCGCCTACGGCTATTTCGAGGCGACCGGC AAGTGGGGTGACGAACCGATCGAGAATTACACCCGCGCAAAGATTTTCGCCGAAGCCGGCAAACGCACCGACCTCGCGAT CCGTTTCTCCACCGTCATCGGCGGTCGGGATTCCTCGGAGGCCGCCCGCGACCCGCGCGGCTTCGCGATCAAGTTCTACA CCGAGGACGGCAACTGGGATCTGGTCGGCAACAATCTCGGCGTGTTCTTCATCCGGGACGCGATCAAGTTCCCCGATGTC ATCCACGCGCTCAAGCCCGACCCGGTGACCTTCCGGCAGGAGCCCGCGCGCATCTTCGACTTCATGTCGCAGACGCCCGA GGCCATGCACATGCTGGTCAACCTGTTCAGCCCGCGCGGGATCCCGGCGAACTACCGCACCCAGCAGGGCTTCGGCGTGA ACACCTACAAGTGGGTCAACGCCGAGGGCGTCACCCACCTGGTGAAGTACCACTGGATCCCGAAGGCGGGCGTGAAGAGC CTCACCGAGGCCGACGCCGCCGCCATCCAGGCCCAGGATCTCGGGCACGCGAGCAAGGATCTGTACGAGCACATCGAGGC CGGCGACTATCCCGAATGGGAGTTGCGGGTGCAGATCATGAGCGACGACGAGCATCCGGAGCTGAATTTCGATCCGCTCG ACGACACCAAGGTCTGGCCGGAAAACGAGTTCCCGCCGAAACCGGTCGGCAAGATGGTGCTCAACCGGAACGTGAGCAAT CACTTCCTGGAGAACGAGCAGATCTCCTTCGGCACCGGCGTGCTGGTCGACGGACTGGATTTCTCCGACGACAAGATGCT GGTCGGCCGCACGTTCTCGTATTCGGACACCCAGCGCTACCGCGTCGGCCCGAACTATCTGCAGCTGCCGGTGAACCAGG CCAAGAACGCGCACGTGGCCACCAATCAGCAGGGCGGGCCGATGGCCTACGGCATCGACGATGTCGGCGAGAACCCGCAC GTCAACTACGAACCGTCGATCACCGGTGGTTTGCGGGAAGCCCAATATCCGACCCACGACGAACAGGGCCCGGAGATCAG GGGCAGGCTCACCCGCAAGCGCATCCCGCGCACCAACGACTACGAGCAGGCCGGCCAGCGCTACCAGCTCATGGAGCAGT GGGAGAAGGACGACCTGGTGACCAACCTGGTCGCCAACATCGGCCAGGCCACCCGCGAGGTGCAGGAGCGCATGGTGTGG CACTTCTACATGTGCGACGACGAGCTGGGCGAACGCGTCGGCCAGGGGCTCGGCATCAGCGCCGACGACGTGCGCGGACT GCCCCCGCTGCAGAGCCAGACGCTGTCCGACGAGGAATTGCAGCGCGCGGCCAACCTGGGCAAGAACGGCCCGCGCGACG TCGAGGGGTTGCAGATGACCCACTGCGTCCCCGACGAACGCGAAGTGCACGCCGCCGCGTGA Protein sequence : MTDVASQGAAQGDDRRVLTNRQGHPVFDNQNQRTVGARGPATLENYQFLEKISHFDRERIPERVVHARGAVAYGYFEATG KWGDEPIENYTRAKIFAEAGKRTDLAIRFSTVIGGRDSSEAARDPRGFAIKFYTEDGNWDLVGNNLGVFFIRDAIKFPDV IHALKPDPVTFRQEPARIFDFMSQTPEAMHMLVNLFSPRGIPANYRTQQGFGVNTYKWVNAEGVTHLVKYHWIPKAGVKS LTEADAAAIQAQDLGHASKDLYEHIEAGDYPEWELRVQIMSDDEHPELNFDPLDDTKVWPENEFPPKPVGKMVLNRNVSN HFLENEQISFGTGVLVDGLDFSDDKMLVGRTFSYSDTQRYRVGPNYLQLPVNQAKNAHVATNQQGGPMAYGIDDVGENPH VNYEPSITGGLREAQYPTHDEQGPEIRGRLTRKRIPRTNDYEQAGQRYQLMEQWEKDDLVTNLVANIGQATREVQERMVW HFYMCDDELGERVGQGLGISADDVRGLPPLQSQTLSDEELQRAANLGKNGPRDVEGLQMTHCVPDEREVHAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 8e-86 | 43 |
