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Name : thiC (nfa53160) Accession : YP_121532.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 5617123 - 5618766 bp Length : 1644 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGGCATCCGCCGATCGCGTCACCGCACCCGTCGACACCGTCACCACCGGCCCCATCGAGGGCAGCGTCAAGCACTACCG CGAGGTGGACGGGCTCCGAATCCCGGTGCGGCGCATCAATCTCACCAACGGCGAGACCTTCGACGTGTACGACACCTCGG GCCCGTACACCGACGAGAACGCCACCATCGACCTGGAGGCCGGTCTGCCCAAGCTGCGCGACAGCTGGGACAAGCCGACC GTCGCGGGCCCGCGCACCCAGCTCGCCTGGGCCCGCGCCGGCATCGTCACCCCGGAGATGCGCTTCATCGCCGCCCGCGA GGGCGTCGAACCGGAACTGGTGCGCGCGGAGGTGGCGGCCGGTCGTGCCGTCATCCCGGCCAACCACAACCATCCCGAAC TCGAGCCGACCATCATCGGCAAGAAGTTCCTGGTGAAGATCAACGCCAACATCGGCAACTCGGCGGTCTCCTCTTCGATC GCCGAGGAGGTGGAGAAGATGGTGTGGGCCACCCGCTGGGGCGCCGACACCATCATGGACCTGTCCACCGGCAAGAACAT CCACGAGACCCGCGAGTGGATCCTGCGCAACTCGCCGGTGCCGGTCGGCACCGTGCCGATCTACCAGGCGCTGGAGAAGG TCAACGGCGATCCGGCCGCGCTCACCTGGGAGATCTACCGCGACACCGTGATCGAGCAGGCCGAGCAGGGCGTGGACTAC ATGACCGTGCACGCGGGCGTACTGCTGCGCTACGTGCCGTTGACCGCCAAGCGCGTCACCGGCATCGTCTCGCGTGGCGG CTCGATCATGGCGGCCTGGTGCCTGGCGCACCATCGGGAGTCGTTCCTGTACACCCATTTCGAGGAACTGTGCGAGATCC TGGCCCGCTACGACGTCACCTTCTCCCTCGGCGACGGCCTGCGGCCCGGCTCCGTCGCCGACGCCAACGACGAGGCGCAG TTCGCCGAGCTGCGCACCCTCGGTGAACTCACCAAGATCGCGAAATCCCATGGCGTGCAGGTGATGATCGAAGGCCCCGG CCATGTGCCGATGCACAAGATCGTGGAGAACGTGCGGCTCGAGGAGGAGCTGTGCGAGGAGGCGCCGTTCTACACCCTCG GCCCGCTGGCCACCGACATCGCACCCGCCTACGACCACATCACCTCGGCCATCGGCGCCGCGATCATCGCCCAGGCGGGC ACCGCGATGCTCTGCTACGTCACCCCCAAGGAGCATCTGGGCCTGCCCAACCGCGACGACGTGAAGACCGGCGTGATCAC CTACAAGATCGCCGCGCACGCCGCCGACCTGGCCAAGGGCCACCCGCACGCCCAGCAGCGCGACGACGCGCTGTCCAAGG CGCGCTTCGAGTTCCGCTGGCGCGACCAGTTCGCGCTCTCGCTCGATCCCGACACCGCGCGCGAGTACCACGACGAGACG ATGCCCGCCGAGCCCGCCAAGACCGCGCACTTCTGCTCGATGTGCGGCCCGAAGTTCTGCTCGATGCGCATCTCCGCCGA CGTCCGCGAGTACGCCGAGGCCAACAACCTCACCGACGTCGCGGCCATCGAGGCCGGCATGGCCGCCAAGTCCGCCGAGT TCGCCGAATCCGGCGGCAAGGTCTACCTGCCCGTCGTGTCCTGA Protein sequence : MASADRVTAPVDTVTTGPIEGSVKHYREVDGLRIPVRRINLTNGETFDVYDTSGPYTDENATIDLEAGLPKLRDSWDKPT VAGPRTQLAWARAGIVTPEMRFIAAREGVEPELVRAEVAAGRAVIPANHNHPELEPTIIGKKFLVKINANIGNSAVSSSI AEEVEKMVWATRWGADTIMDLSTGKNIHETREWILRNSPVPVGTVPIYQALEKVNGDPAALTWEIYRDTVIEQAEQGVDY MTVHAGVLLRYVPLTAKRVTGIVSRGGSIMAAWCLAHHRESFLYTHFEELCEILARYDVTFSLGDGLRPGSVADANDEAQ FAELRTLGELTKIAKSHGVQVMIEGPGHVPMHKIVENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAIIAQAG TAMLCYVTPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPHAQQRDDALSKARFEFRWRDQFALSLDPDTAREYHDET MPAEPAKTAHFCSMCGPKFCSMRISADVREYAEANNLTDVAAIEAGMAAKSAEFAESGGKVYLPVVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-157 | 64 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-157 | 64 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-151 | 60 |
