Gene Information

Name : nfa48660 (nfa48660)
Accession : YP_121082.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2310
EC number : -
Position : 5079488 - 5080063 bp
Length : 576 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGTCACACTCGCCAAGGGCGGCAACGTCTCGCTGTCCAAGCAGGCGCCGAACCTGACGAAGGTCGCGGTCGGACT
CGGCTGGGACGTCCGTACCACCACCGGTGCGGACTACGACCTCGATGCCAGCGCGCTGGCGTGCGGGCCGAACCTGAAGG
TGCTGTCCGACCAGCACTTCGTCTTCTACAACAACCTGCGCTCGCCGGAGGGCACCATCGAGCACACCGGCGACAACCTC
ACCGGCGAGGGCGAGGGTGACGACGAGGTGGTCAACGTCGATCTGGCCGCCACGCCGCCGACGATCACCAACATCTTCTT
CGCCGTGTCGATCCACGACGCCGACGCGCGCGGGCAGTCCTTCGGCCAGATCCGCAACGCCTTCATCCGGGTCGTCGATC
AGCAGACCGGCGCCGAGCTGGCCCGCTACGACCTGACCGAGGACGCCTCCACCGAGACCGCGATGATCTTCGGCGAGCTG
TACCGGCACGGCGGCGAGTGGAAGTTCCGCGCCATCGGCCAGGGCTACGCCTCGGGCCTGGCCGGCATCGCCCGCGACTA
CGGGGTCAACGTCTAG

Protein sequence :
MSVTLAKGGNVSLSKQAPNLTKVAVGLGWDVRTTTGADYDLDASALACGPNLKVLSDQHFVFYNNLRSPEGTIEHTGDNL
TGEGEGDDEVVNVDLAATPPTITNIFFAVSIHDADARGQSFGQIRNAFIRVVDQQTGAELARYDLTEDASTETAMIFGEL
YRHGGEWKFRAIGQGYASGLAGIARDYGVNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
terD NP_286710.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 4e-57 64
terD_2 NP_287118.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 4e-57 64
tlrC AAF36435.1 putative tellurium resistance protein C Not tested TAI Protein 9e-57 63
unnamed ACY75541.1 tellurium-resistance protein Not tested Tn6060 Protein 5e-54 61
tlrB AAF36434.1 putative tellurium resistance protein B Not tested TAI Protein 7e-56 60
terE NP_286711.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 1e-55 60
terE_2 NP_287119.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 1e-55 60
unnamed ACY75542.1 tellurium-resistance protein Not tested Tn6060 Protein 2e-57 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nfa48660 YP_121082.1 hypothetical protein BAC0389 Protein 1e-56 63
nfa48660 YP_121082.1 hypothetical protein BAC0390 Protein 3e-58 60
nfa48660 YP_121082.1 hypothetical protein BAC0392 Protein 7e-25 41