Gene Information

Name : nfa41490 (nfa41490)
Accession : YP_120362.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Unknown
Product : RNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 4294525 - 4296876 bp
Length : 2352 bp
Strand : -
Note : -

DNA sequence :
GTGGGCACGCTCGCGGGTCCGGCGGGCGTCGGCAGCCGCATCGCCGAGGAACTCGGGGTGCGGGAGAGCCAGGTCCGCGC
CGCGGTCGAACTGCTCGACGCGGGCTCGACCGTGCCCTTCATCGCCCGGTACCGCAAGGAGGTGACCGGCGGCCTCGACG
ACGCGCAGCTGCGCACGCTGGAGGAACGCCTGCACTACCTGCGCGAGCTGGACGAGCGCCGCGCCGCCATCATCGAATCC
ATCCGCGCCCAGGGCAAACTCGACGACGAGCTGCACCGCAGCCTGCTGCTGGCCGAGACCAAGGCCCGCCTCGAGGACAT
CTACCTGCCCTACAAGCCCAAGCGGCGCACCAAGGCCCAGATCGCGCGCGAGGCCGGGCACGAGCCGGTGGCCGACGCCC
TGCTGGCCGACCCCACCACCGATCCCGCGCAGTACACCGCCGAGCAGCTCGACGGCGCCCGCGCGATCCTGGTCGAGCGG
TTCGCCGAAGACGCCGACCTGGTCGGTGAGTTGCGCGAGATGATGTGGAATCGCGGGCAGCTCACCTCCACCGTGCGGCC
CGGCAAGGAGGAGGCGGGGGCGAAGTTCGCCGACTACTTCGAGTTCAGCGAGGCGTTCAGCTCGCTGCCCTCACACCGGG
TGCTCGCGCTGTTCCGCGGGGAGAAGGAGGAGGTGCTCAGCCTCCAGCTCGAGCCCGACACCGAGGAACTCGCGCCGGGG
GAACGCAGCGTCTACGAGGGCCGCATCGCCGCGAAGTTCGGCATCGCCGATCGCGGACGCCCCGCCGACAGCTGGCTGCT
CGACACCGTGCGGTGGGCGTGGCGGACCAAGTTGCAGGTGAGCCTGGGCATCGACACCAGGATGCGGCTGCGGCAGGCGG
CGGAGAAGGACGCCGTCGACGTCTTCGCGGCGAACCTGCGCGATCTGCTGCTGGCCGCCCCCGCGGGCACCCGCACCACG
ATGGGCCTTGACCCCGGCTACCGCACCGGTGTCAAGGTGGCCGTCGTCGACGCGACCGGCAAGGTGGTCGCGACCGAGGT
GATCTACCCGCACAAGCCGCAGGGCCAGACCGAGAAGTCGCTGGCCGTGCTCGGCGCGCTGGTGGCCCGCTTCGGTGTCG
AACTGATCGCGATCGGCAACGGGACGGCTTCGCGCGAGACCGACGCGCTGGTGGCCGAGCTCATCTCCCGCATCGGTGCC
ACGTCGGACAAGAAGCCGACCAAGGTGGTCGTCTCCGAGGCCGGCGCCTCGGTGTACTCCGCCTCCGCCTACGCCTCCCA
GGAACTGCCGGAACTGGACGTCTCGCTGCGCGGCGCGGTCTCGATCGCACGTCGGTTGCAGGACCCGCTGGCCGAGCTGG
TGAAGATCGACCCCAAGTCGATCGGCGTGGGCCAGTATCAGCACGACGTCTCCGAGACGCTGCTGGCCCGCTCGCTGGGC
GCGGTGGTCGAGGACGCGGTCAACGCGGTCGGCGTCGACGTCAACACCGCGTCGGTGCCGCTGCTGTCGCGGGTGTCGGG
CATCGGCTCGGCCGTCGCGGAGAGCATCGTCGCCCATCGGGACCAGAACGGGCCGTTCCGTTCCCGTACCGCCCTGCTCG
ACGTGCCCCGGCTCGGGCCGAAGGCATTCGAACAGTGCGCGGGCTTCCTGCGCATCCGCGGCGGCGACGATCCGCTGGAC
ACCTCGGCGGTGCACCCGGAGGCCTACCCGGTGGTGCGGCGCATTCTCGAGGCCACCGGCCGCCGCGTCGACGAGCTGAT
CGGCAACACCGGCGTGCTCCGGTCGTTGCGGCCCGCCGAGTTCACCGACGAGAAGTTCGGCGTGCCCACCGTCACCGACA
TCATCGGCGAACTGGAGAAACCCGGCCGCGACCCGCGCCCGGAGTTCAAGACCGCCGAATTCGCCGCCGGGGTGGAGAAG
GTCGCCGACCTGAAGCCGGGCATGGTGCTCGAGGGCGTGGTGACCAACGTCGCGGCGTTCGGCGCGTTCGTCGACGTCGG
CGTCCACCAGGACGGGCTGGTGCACGTCTCGGCCATGTCGCACTCCTTCGTCAAGGACCCGCGCGAGGTCGTCAAGTCCG
GTGACGTGGTGAAGGTGAAGGTGCTCGAGGTCGACGTCGCCCGTCAGCGCATCGGCCTGTCGCTGCGGCTGGACGACGAG
CCGGGCGCCGCCAAGGGCGAGCGCGGCGGCCAGCGCGAGGGCGGGCGCCGCGGCGGTTCCGGTGGTGCCGGCGGCGGACA
ACGGCAGAATGGACAGGGGCGGCAGCAGAGTCGCAACCAGGGCAGGCGCAACGCCCCCGCACCCAGCGGGTCGATGGCCG
ACGCCCTGCGCCGCGCCGGATTCGGGAAGTAG

Protein sequence :
MGTLAGPAGVGSRIAEELGVRESQVRAAVELLDAGSTVPFIARYRKEVTGGLDDAQLRTLEERLHYLRELDERRAAIIES
IRAQGKLDDELHRSLLLAETKARLEDIYLPYKPKRRTKAQIAREAGHEPVADALLADPTTDPAQYTAEQLDGARAILVER
FAEDADLVGELREMMWNRGQLTSTVRPGKEEAGAKFADYFEFSEAFSSLPSHRVLALFRGEKEEVLSLQLEPDTEELAPG
ERSVYEGRIAAKFGIADRGRPADSWLLDTVRWAWRTKLQVSLGIDTRMRLRQAAEKDAVDVFAANLRDLLLAAPAGTRTT
MGLDPGYRTGVKVAVVDATGKVVATEVIYPHKPQGQTEKSLAVLGALVARFGVELIAIGNGTASRETDALVAELISRIGA
TSDKKPTKVVVSEAGASVYSASAYASQELPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLG
AVVEDAVNAVGVDVNTASVPLLSRVSGIGSAVAESIVAHRDQNGPFRSRTALLDVPRLGPKAFEQCAGFLRIRGGDDPLD
TSAVHPEAYPVVRRILEATGRRVDELIGNTGVLRSLRPAEFTDEKFGVPTVTDIIGELEKPGRDPRPEFKTAEFAAGVEK
VADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSHSFVKDPREVVKSGDVVKVKVLEVDVARQRIGLSLRLDDE
PGAAKGERGGQREGGRRGGSGGAGGGQRQNGQGRQQSRNQGRRNAPAPSGSMADALRRAGFGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 60