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Name : nfa33140 (nfa33140) Accession : YP_119525.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3515191 - 3517044 bp Length : 1854 bp Strand : - Note : - DNA sequence : GTGACGATGGGTGGTACCGCAGCAGAGCTCCGAACGGACGAGGCCACACCGCCACCGTCGGCATCCGCGGAGTCGACCGC GGTGTCCCCCGGTAGCGCGCTGTTCCGGGTGACCGAGCCGGTCCGCGGACGGCTGACCGCGTCGCTGGCCATCGCCGCAC TGGGTGGCGCGGCCGGGGTGACCGGGTTCGTGGGAACGGCACTGGCGCTGGGGGAGTTGTTCGACGCCGACACGCGGACC GGCACCGTGGTGGCCTTCCTGGTGTTGGCCGCGGCCGGATTCCTCGCCCGATTCGCCCTGCGTGCCTGGTCGTTCCTGCT CTCGCATCTGGCATCGTTCGACCTCGAGCAGCGTCTGCGCAGCGATCTGGCCGCACACCTGGGCCGGATGCCGTTGGGGG AGGCGCAGCGCCTTGGCTCCGGCGCGGTGAAGAAGATCGTGCAGGACGACGTGCGCGGCCTGCACATGGCGGTCGCCGAC GCCGTGCCGCTGGCCGGGTTCACCCTGGCCCAGCCCGTCGCGGCGCTGGTGGCGCTGGGCCTGGTGGACTGGCGGCTGCT GCTGGCGGTCGCGCTGTTCCTGCCGGTGGTGTTCGTCGGGATGCAGCTCAGCCTGCGCGACTACGTCGAGACCCGCCGCC GCTACGACGAGGCCAACGAGGCCATCAACGCGGCCACGGTGGAATTCGTGCAGGGCATGCCGGTGGTGCGGACCTTCGAC GACGGCACGGTCTCGTTCCGGCGCTTCGTCGACCGGGTGCGGCAGTTCAACTTCGCGACCACCAACTGGCAGAACAACAA CCGCAGCGCGATGATCTTCGCCAACCTGACGGTCGCGCCGCTGCCGACCATCGTGATCGTGACCGCGGTCGGCATCTGGC TCACCTCGACCGGGTCGATGTCGCCCGCGCAACTGATCGCCGCGATCCTCATCGGCACCCTCCCGGTGGAATCGGTGGTC CCGTTGATGAACCTGTCCAACCTGCTCAACGACTCCAAGGCAGGCGCAGCCCGCATCGTCGAACTGCTCGACATCGAGCC GCTGCCGGAGCCCGCGGACCCGCAGACTCCGGCCGACGGATCCATCGAATTCCGTTCCGTCCGTTTCTCGTACCCGGGAG CGGACCGGCCCGCGCTGGACGGGGTGGACCTGACGATCCCGAGCGGCAGTGTGTGCGCGCTGGTCGGCTCGTCCGGCTCG GGCAAATCGACGGTCGCCCGGCTCATCCCGCGGTTCTGGGACGTCGATTCCGGGCAGGTCCTCGTCGGCGGGGTGGACGT CCGGCAGATCGCGTCGCAGGACCTGCTCGCCACCCTGGCGATGGTGTTCCAGGAGCCGTTCCTGCTCTCCGACACCGTGG CCGAGAACATCCGGCTGGCCCGGCCGTCGGCCACCGACGCCGAGGTCGAGGCCGCCGCGCGGGCCGCCCGCGCCCACGAC TTCATCGTCTCGGAACTGCCGCGCGGCTACGACACCCAGGTCGGTGAGCGGGGCGCCCGGCTCTCCGGCGGGCAGCGCCA GCGCATCACCATCGCACGTGCCCTGCTCGCGGACGCGCCGATCGTCGTCCTCGACGAGGCGACCTCCTTCGCCGACCCGG AGAACGAAGCGGCGATCCAGGACGCGATCGCCGAACTCACCCGCGGCCGCACCGTGCTGGTGGTGGCGCACCGGCTGTCC ACGATCGTCGACGCGGACCGCATCGTGGTGCTGGAATCCGGCCGGGTCGCCGAATCCGGCACGCACACCGAACTGCTCGC CGCCGGCGGGCGCTATGCCCGGCTCTGGGAACACCACGAGCGCGCCCGCGGATGGGGTCTCGGCAGCTCGACCAAGGAGG CCATGCGCCGATGA Protein sequence : MTMGGTAAELRTDEATPPPSASAESTAVSPGSALFRVTEPVRGRLTASLAIAALGGAAGVTGFVGTALALGELFDADTRT GTVVAFLVLAAAGFLARFALRAWSFLLSHLASFDLEQRLRSDLAAHLGRMPLGEAQRLGSGAVKKIVQDDVRGLHMAVAD AVPLAGFTLAQPVAALVALGLVDWRLLLAVALFLPVVFVGMQLSLRDYVETRRRYDEANEAINAATVEFVQGMPVVRTFD DGTVSFRRFVDRVRQFNFATTNWQNNNRSAMIFANLTVAPLPTIVIVTAVGIWLTSTGSMSPAQLIAAILIGTLPVESVV PLMNLSNLLNDSKAGAARIVELLDIEPLPEPADPQTPADGSIEFRSVRFSYPGADRPALDGVDLTIPSGSVCALVGSSGS GKSTVARLIPRFWDVDSGQVLVGGVDVRQIASQDLLATLAMVFQEPFLLSDTVAENIRLARPSATDAEVEAAARAARAHD FIVSELPRGYDTQVGERGARLSGGQRQRITIARALLADAPIVVLDEATSFADPENEAAIQDAIAELTRGRTVLVVAHRLS TIVDADRIVVLESGRVAESGTHTELLAAGGRYARLWEHHERARGWGLGSSTKEAMRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtP | YP_853073.1 | inner membrane ABC-transporter | Not tested | PAI IV APEC-O1 | Protein | 1e-90 | 46 |
| ybtP | NP_669704.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-90 | 46 |
| ybtP | NP_993009.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-90 | 46 |
| irp6 | YP_002346904.1 | lipoprotein inner membrane ABC transporter | Not tested | HPI | Protein | 8e-91 | 46 |
| ybtP | CAA21388.1 | - | Virulence | HPI | Protein | 8e-91 | 46 |
| ybtP | YP_070126.1 | lipoprotein inner membrane ABC-transporter | Virulence | HPI | Protein | 4e-91 | 46 |
| irp6 | YP_001006813.1 | lipoprotein inner membrane ABC-transporter | Not tested | HPI | Protein | 4e-90 | 45 |
| irp6 | CAB46573.1 | lipoprotein inner membrane ABC-transporter, Irp6 | Virulence | HPI | Protein | 5e-90 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| nfa33140 | YP_119525.1 | ABC transporter | BAC0432 | Protein | 4e-91 | 46 |
