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Name : nfa33130 (nfa33130) Accession : YP_119524.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3513449 - 3515194 bp Length : 1746 bp Strand : - Note : - DNA sequence : ATGAGGAGAATTCTGCGGCTGATGCTGCTCGCCGCCGGGGACTACCGCGACGAGTTCCGCCGTACCCTGTGGTGCGCGCT GCTCGGGTCGATCGTGCAGGCGCTCGCCTACGCCACGTTGATCCCGATCCTGTACGAGCTGAGCAGGCCGGAGGTCGACA TCACCGCCGCTTGGACCTGGTTCGGCGTGCTGGTGGCCTGCTGGGTGGTCCAGGCGGGTCTGCACTACGGGCAGCTGCGG TTCGAGTTCGGGCGGTGGGCCGACGTGCTCGCCGCCACCCGGTTGCGGCTCGGCGACAAGCTGCGGACCATGCCGCAGGC CGACCTGGAGCGCCGCGCCGCCGGTGACCTCACCACCGTCATGGGCAGCAACGTCGCCAACGCGACGATGAGCTCGTCCG GGATGGCGTTGCTGTTCATCCAGATGGTGACCGTCCCGGCGGTGATCGGCGTGCTCATCCTCGCCGTCGACTGGCGGCTG GGTCTGGTGCTCGCGGCCTCGCTGCCGTTCGCGGTGTTGTTCGTCCGGCGCATCCAGCAGATCACCGGCGCGGGCGCGCG CCGGACCGACGCGGCCGACGCCGCGGCCGCGAGCCGGGTGGTCGAGTACGTGCAGGGCCTGCCGGTGCTGCGCGCCACCG GGCAGATCGGCAGCGCGTCCCGGCGCCTGGTCGAGACGTTGGAGGAGCAGAACGCGGCGATGTCGGCCATGCAGAAGCGG CTGACCTGGCCGGGCCTGCTGGCCGCCGGGGTGGTGCAATTGTGTCTGGTCGCGATGGTCGCGCTCGGCGCGGCGCTGGT GCTCGAGCTGCGGATGTCGGCGGCGCTGCTGATCGCCGTGGTCGCCGCCGCCGTGCGATTCGCCGAGCCCATGTCGACGA TGGCCAACTTGTCGGCCATCTTCGAGATCACCGACTCGGCGCTGGAACGCGTCGGTGCCGTGCTCGACGCCCCGGCGTTG CCGGTGGGTGACCCGCGGGCGCGCATCACCGGCCACGACCTCGCCGTCGAGGATGTGCACTTCACCTATCCGGACGGCGC CCCGGTGCTGCGCGGAGTGTCGTTCACCGCTCCCGCCCGCTCGCTGACGGCCCTGGTCGGCCCGTCGGGATCCGGCAAGA CGACGGTGACCAGGATGCTGACCCGGTACGCGGACCCCGACGCGGGCAGCATCCGGATCGGAGGCGTCGATCTGCGCGAA CTCGACCCGGTCGAGATCTACCGCAACATCGCGGTGGTCTTCCAGGACGTGTACCTCTTCGACGACACCATCCGGGCGAA CATCGCGATGGCCGCCCCGGGCGCCACGCAGGAGCAGATCGAGGCCGCGGCCCGCGCGGCCAACGTGCACACCTTCGTGA CCCGGCTGCCGCACGGCTACGACACCCGGGTCGGCGAGATCGGCGGCGCACTGTCCGGCGGTGAGCGCCAGCGTATTTCG ATCGCCCGCGCGATCCTCAAGGACGCGCCGATCGTCCTGCTGGACGAGCCGACCGCCGCGCTGGACACCGAGAGCGAGGT GGCCGTGCAGGAAGCCATCGACGCACTGGTCGCGGAGAAGACCGTCGTCGTGATCGCGCACCGGCTCTCCACCGTGGTGG CCGCGGACCAGATCCTGGTGCTCGAGGACGGGGTGGTGGCCGAGCGCGGCACCCACGAGGAGCTGCTGGCGCGGCAGGGG CGCTACCACGCCATGTGGGCGGCGCAGACCCGCGCCCGGCACTGGCGGGTCACCGCGTCCGTCTAG Protein sequence : MRRILRLMLLAAGDYRDEFRRTLWCALLGSIVQALAYATLIPILYELSRPEVDITAAWTWFGVLVACWVVQAGLHYGQLR FEFGRWADVLAATRLRLGDKLRTMPQADLERRAAGDLTTVMGSNVANATMSSSGMALLFIQMVTVPAVIGVLILAVDWRL GLVLAASLPFAVLFVRRIQQITGAGARRTDAADAAAASRVVEYVQGLPVLRATGQIGSASRRLVETLEEQNAAMSAMQKR LTWPGLLAAGVVQLCLVAMVALGAALVLELRMSAALLIAVVAAAVRFAEPMSTMANLSAIFEITDSALERVGAVLDAPAL PVGDPRARITGHDLAVEDVHFTYPDGAPVLRGVSFTAPARSLTALVGPSGSGKTTVTRMLTRYADPDAGSIRIGGVDLRE LDPVEIYRNIAVVFQDVYLFDDTIRANIAMAAPGATQEQIEAAARAANVHTFVTRLPHGYDTRVGEIGGALSGGERQRIS IARAILKDAPIVLLDEPTAALDTESEVAVQEAIDALVAEKTVVVIAHRLSTVVAADQILVLEDGVVAERGTHEELLARQG RYHAMWAAQTRARHWRVTASV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp7 | YP_002346905.1 | ABC transporter permease | Not tested | HPI | Protein | 6e-87 | 43 |
| ybtQ | NP_669703.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 6e-87 | 43 |
| ybtQ | NP_993010.1 | ABC transporter permease | Virulence | HPI | Protein | 6e-87 | 43 |
| ybtQ | YP_070127.1 | ABC transporter permease | Virulence | HPI | Protein | 6e-87 | 43 |
| ybtQ | CAA21387.1 | - | Virulence | HPI | Protein | 6e-87 | 43 |
| irp7 | CAB46572.1 | inner membrane ABC-transporter, Irp7 | Virulence | HPI | Protein | 3e-86 | 43 |
| irp7 | YP_001006812.1 | inner membrane ABC-transporter YbtQ | Not tested | HPI | Protein | 4e-86 | 43 |
| APECO1_1055 | YP_853072.1 | ABC transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-87 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| nfa33130 | YP_119524.1 | ABC transporter | BAC0433 | Protein | 3e-87 | 43 |
