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Name : nfa31420 (nfa31420) Accession : YP_119353.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3338037 - 3339797 bp Length : 1761 bp Strand : + Note : - DNA sequence : ATGACCACCACCGCACCCGATGTCGGCCTGGCCGCCCCCGGCGCCCTGTCCCGCCTGCTCGCACCCGTGCGCACCCACCT GCTGGTCTGCGCGGTGCTGTCGGCGGCCGGAGCCGTCTGCGGATTCCTGCCCTACCTGGCGATCGCCGAGATCGCCCGCG CCGTCCTGGCCGGCGGCACCGCCGAGGCCGTCGGGACGGTTCGCCTCTGGGTGGCCGTCGGCATCGCCGGGGCCGCGGGA CGCATGGTGCTGCTGTTCGCCTCGTCGCGGCTGGGCCACTACGCCGACGCACGGCTGCTCCACGACCTGCGGGCGCGCAT GATCCGCCACCTCGGCGCACTGCCGCTGGGTTGGTTCACCAGCAACGGCTCCGGCCGGATCAAGAAGCGCATGACCAATG ACCTCGAGGACATGCACATCCTGATCGCCCACGCGCTCGGCGAGATCGTGGGTGCGGTGGTGGCCGTCGCGCTCGGCCTG ACCTACCTGTGCTCCGTCGACTGGCGGTTGACCGGCGCCGCGGTGGCGGCGCTGCTGATGCTCGCGGTGAGTTACCGGGT GGCGATGCGTTCGGCCAGCAGGCACACCGCGCGGCTGATCGCCGCCGAGGCCGACATCAGCGCGGCCAGCGTGGAATACG CCGACGGCGTGGCGGTGGTGAAGACCTACGGCGCGGGCGGACGGGTGCTGGACCGGTTCGACCGCGCGGTGCGCGAACAC TCCCGTGCGCTCGCCGCGTGGGCCGCCGAGACGAAGTACAGCAGCGCGCTGTCGCGGCTGCTGTCCTCGGAGATGTCGCT GCTGACGGTCCTCGCGGTCGCCGGGTTGGCGCTGCTGGCCGCCGGCCGGATGCCCGCCGCGGATCTGGTGCCGTTCCTCG TGGTCGGCATCGGGCTGCCCACCACGATCAACCCCGCCATCCAGGGCTCGCAGGGACTGCGCAAGGGGCGGGCGGCCGCG GGCAACATCGAAGGGCTGCTGCGGCATCCGCCGCTGCCCGAACCGGCGAATCCGGCCCTCCCCGACGGCGCGCGGATCGA ATTCGACGACGTCCACTTCTCCTACGACGGCCGCACCGAGGTCCTGCGCGGGGTGCGCGCGGTGTGTGAGCCGGGCACGA TCACCGCGCTGGTCGGCCCGTCCGGCGCGGGGAAATCGACCCTTGCCGCCCTGGTCCCCCGGTTCCACGACGTGACCGGC GGTGCCGTGCGGATCGGCGGGGTGGACGTGCGCGACATCCCCACCGAACGCCTGCTCGCCTCGATGGCACTGGTGTTCCA GGACGTCGTGCTCGTGCGCGACACCGTCACCGAGAACATCCGGCTCGGGCGACCCGAGGCCGGGCGGGACGAGGTCGAGG CCGCGGCGAAGGCGGCCGCGATCCACGACGTCATCACCGCCCTCCCCGACGGCTACGACACGGTGCTCGGCGTGGACGTG GAACTGTCCGGCGGCGAACGGCAACGGCTCACCATCGCCAGGGCGATCCTGTCCGACGCGCCGATCGTGGTGCTCGACGA AGCGACCGCCGCGCTCGACCCGGACAGCGAAACCGCCGTGCAGCACGCGCTCTCGGCGCTGATCGCCGGGCGGACCGTCC TGGTCGTGGCCCACCGCCTGCACACGATCACCGAAGCCGACCAGATCCTCGTCCTCGACGACGGCCGCGTCGTCGAACGC GGACGCCACGCCGACCTGCTCGCCGCGAACGGGCGCTACGCGCGCATGTGGGCCGCCCAGCACCGCGCGTCCCAGGACTG A Protein sequence : MTTTAPDVGLAAPGALSRLLAPVRTHLLVCAVLSAAGAVCGFLPYLAIAEIARAVLAGGTAEAVGTVRLWVAVGIAGAAG RMVLLFASSRLGHYADARLLHDLRARMIRHLGALPLGWFTSNGSGRIKKRMTNDLEDMHILIAHALGEIVGAVVAVALGL TYLCSVDWRLTGAAVAALLMLAVSYRVAMRSASRHTARLIAAEADISAASVEYADGVAVVKTYGAGGRVLDRFDRAVREH SRALAAWAAETKYSSALSRLLSSEMSLLTVLAVAGLALLAAGRMPAADLVPFLVVGIGLPTTINPAIQGSQGLRKGRAAA GNIEGLLRHPPLPEPANPALPDGARIEFDDVHFSYDGRTEVLRGVRAVCEPGTITALVGPSGAGKSTLAALVPRFHDVTG GAVRIGGVDVRDIPTERLLASMALVFQDVVLVRDTVTENIRLGRPEAGRDEVEAAAKAAAIHDVITALPDGYDTVLGVDV ELSGGERQRLTIARAILSDAPIVVLDEATAALDPDSETAVQHALSALIAGRTVLVVAHRLHTITEADQILVLDDGRVVER GRHADLLAANGRYARMWAAQHRASQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 8e-67 | 41 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 6e-67 | 41 |
