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Name : nfa28010 (nfa28010) Accession : YP_119012.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2989329 - 2991143 bp Length : 1815 bp Strand : + Note : - DNA sequence : ATGACGGCCACCGATCTCGCCGAGGCACGCGAGCAGGACACGCCGGTCACCTCGGTCGCACCCGAACGGACCGCGATGAG CTTGCTGCGCCCGCATCTGCCGGGCTTCGCCGCCGTGGTCGTGCTGCAGGTCGTCGGCGCGCTGGCGGGTCTGGTGCCGC TGCTGGCCGTGGTGGAACTGGGCCGGATCCTCCTGTCGCCGGCACCGATCCAGGAGGGGCGGGTCTGGTCGGTGGTGCTC GCGGGCGCGGCCGGGTTGTTCGTGCGGCTGGTGTGCGGCGCCGCGGCGTCGGGGCTCGCGCATCTGCTCGACAGCCGGGT GCAACTCGCGTTCCGGCGGCAGCTCGCGGCCCGGCTGGGCACGGTGCCGATCGGCTGGTTCTCCCGGCGGCGCACCGGGG AACTGGCGAAGGTGGTCGGCGAGGACGTCAGCGCCGTGCACCCGTTCCTCGCGCACACACCGGGCGAACTCGTCTCCGCC TTCGTGGTGCCGTCGGCCTCGCTGATCTATCTGTTCACCGTGGACTGGCGGCTGACGTTGATCACCCTCGTTCCGGTGCT GCTGGCCGTGGCGGTGGTGCCACTGATGACGACGTCCGCGCGGCAACGCGAACAAGCGGAGTTCGACGCGGCGATGGGCC GGATCGCGGACTCGGTGGTGGAGTTCGTGCAGGGCATCGCGGTGGTCAAGACGTTCGGCGGTGCCGGTCGCGCCAATCGC CGGTTCCACCGCGCCGCCGACGAATTCGCCGACACCTTCTTGCGGATGGTGCGTGGCCTGGCCGGACCGGCGGCCGCGAT GCAGGTGGCGCTGTCGCCGCCGTTCGTCCTGCTGGCCGTGCTGATCGGCGGCACGGTCCTGATCCGCGCCGGCGACATGC CCCCGGCGGATCTGTTGCCGTTCCTGCTGCTCGGCCTCGGACTCACCGCGCCCGTCGCGGCACTGGGGCACGGCTTCGAC GACCTCCAGGCCGCCCGCCGCGCGATCGGCCGGATCCGGGAGGTGCTGGCCGAGCCGCCGCTGCCGGAGCCCGCGCGGCC CGCCGTTCCGCGGGGGCATCGGATCGAACTGCGCGACGTGCGTTTCGGCTACGACGCCGGCCGCGACGTGCTGCGCGGCA TCGACCTGGTGCTCGAACCCGGCACCGTCACGGCCCTGGTCGGGCCGTCGGGCAGCGGCAAATCGACCCTGGTGCAACTG CTTCCGCGATTCTTCGACCCGACCCACGGATCGGTCCGGCTCGGCGGCGTCGACCTGCGTGACCTCGCCCCCGCACAGCT GTACCGGACGGTGTCGTTCGTCTTCCAGGATGTGCGGCTGCTGCGCGCCTCGATCGCGGACAACATCGCGCTCGCGGTGC CGCACGCCGACCGCGACGCCATCGAACGGGCGGCGCGAGGCGCCGCCATCCACGACCGCATCCTGGAACTGCCGAACGGG TACGACTCGGTGGTCGGCGTCGATGTGGTCCTGTCCGGCGGTGAGGCGCAACGTCTTTCGCTCGCCCGCGCCCTGCTGGC CGCCACGCCGGTGCTGGTACTCGACGAGGCGACCGCCTTCGCCGATCCGCAGACCGAACAGGCGGTGCGCCGGACCCTGT CCGCACTCGGCGGCGACCGCACGCTCCTGGTGATCGCGCACCGTCTCGAGACCATCGCCGACGCCGACACCGTCGCGGTA CTCGACAACGGCACCATCGTCGAACGCGGCAGTCCCCGTGAGCTGCTGGCCCGCGGCGGCCGCTTCGCCGCCCTCTGGGA AACCCACCGCACCGCGGTCGCCGACCGCCCCTCGCGAGAAGAGGCACCCCGATGA Protein sequence : MTATDLAEAREQDTPVTSVAPERTAMSLLRPHLPGFAAVVVLQVVGALAGLVPLLAVVELGRILLSPAPIQEGRVWSVVL AGAAGLFVRLVCGAAASGLAHLLDSRVQLAFRRQLAARLGTVPIGWFSRRRTGELAKVVGEDVSAVHPFLAHTPGELVSA FVVPSASLIYLFTVDWRLTLITLVPVLLAVAVVPLMTTSARQREQAEFDAAMGRIADSVVEFVQGIAVVKTFGGAGRANR RFHRAADEFADTFLRMVRGLAGPAAAMQVALSPPFVLLAVLIGGTVLIRAGDMPPADLLPFLLLGLGLTAPVAALGHGFD DLQAARRAIGRIREVLAEPPLPEPARPAVPRGHRIELRDVRFGYDAGRDVLRGIDLVLEPGTVTALVGPSGSGKSTLVQL LPRFFDPTHGSVRLGGVDLRDLAPAQLYRTVSFVFQDVRLLRASIADNIALAVPHADRDAIERAARGAAIHDRILELPNG YDSVVGVDVVLSGGEAQRLSLARALLAATPVLVLDEATAFADPQTEQAVRRTLSALGGDRTLLVIAHRLETIADADTVAV LDNGTIVERGSPRELLARGGRFAALWETHRTAVADRPSREEAPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 8e-61 | 42 |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 1e-60 | 41 |
