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Name : gabD (nfa27730) Accession : YP_118984.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2941610 - 2943073 bp Length : 1464 bp Strand : - Note : - DNA sequence : GTGACCGATCGCGAGGGCGCGCTGCTTGCCACCGCGCCGCACCAATTGTTCATCGGCGGCGAATGGGTCGACGCCACCGG CGGCGCCACCTTCGCGGTGCACGATCCCGCCACCGGCGAGATCGTGCGCGAGGTCGCCGACGCCACCGCAGAGGACGCCG TGCGCGCCCTCGACGCCGCCGTTGCCGCCCAGGAGTCGTGGGCGGCCACCGCTCCGCGCACTCGCGGCGAGATCCTGCGC CGCGCCTGGGAACTCGTGCAGGAGCGGGCCGAGGACCTGGCGCTGCTGATGACCCTGGAGATGGGCAAGCCGCTGGCCGA GGCGCGCGGTGAGGTCACCTACGGTGGCGAGTTCCTGCGCTGGTTCAGCGAAGAGGCGGTGCGCATCCACGGCCGCTACG GGCTCAATCCCGAGGGCACCGGGCAGATGATCGTCTCCCAGCGCCCGGTCGGGCCCTGCTACTTCATCACGCCCTGGAAC TTCCCGTTCGCGATGGCGACCCGCAAGATCGCCCCCGCCCTGGCCGCGGGCTGCACGGTGGTGGTGAAGCCACCCCAGCT CACCCCGCTGACCACCCTGTTCTTCACCGGTCTGCTCGCCGAGGCCGGGCTGCCCGCGGGCGTGGTGAACGTGGTGACAT CCACGTCCTCGCGGCGGGTGTCGGCGCCGATCATCGCCGACTCCCGGCTGCGCAAACTCTCCTTCACCGGCTCGACGGAG GTCGGCAGGCAGCTCATCGCCCAGGCCGCCGACAACGTGCTGCGGGTGTCGATGGAGCTCGGCGGCAACGCGCCGTTCGT GGTGTTCGAGGACGCCGACCTGGACAAGGCCGTCGAGGGCGCGCTGGCGGCCAAGTTCCGCAACATCGGCCAGGCCTGCA CGGCCGCCAACCGGTTCATCGTGCACGAACAGGTGGCCGAGGAGTTCGCCGCGCGGGTCACCGAACGGGTCGCGGCCATG AAGATCGGCCGCGGCACCGAGGACGGCGTCACCATCGGCCCGCTCATCGATGACGACGCCGTCGCCAAGGCCCACGAACT GGTCACCGACGCCACCGCCCGCGGCGCGGTGGTGCGCACCGGCGGCGAACGGATCGACGGCCCGGGCAGCTTCTACCGAC CCACCGTGCTCACCGGCGTCACCGAGGGCAGTGCGATCCTGCGCGAGGAGATCTTCGGCCCGGTGCTGGCCATCGCCACC TTCACCACCGAGGACGAGGCGGTGCGCCTGGCCAACAACACCGAATACGGCCTGGTGTCCTACGTCTACACCCGGGACCT GGCCCGCGGCCACCGCATGATCGACAAGCTCGAGACCGGCATGATGGGCCTCAACGCCGGCGTCGTCTCCAACGCCGCCG CCCCCTTCGGCGGCGTCAAACAGTCCGGCGTCGGCCGCGAGGGCGGCTTCGAGGGCATTCACGAATTCCTCTCCACGAAA TACACGCTGATCCCCACCAGCTAG Protein sequence : MTDREGALLATAPHQLFIGGEWVDATGGATFAVHDPATGEIVREVADATAEDAVRALDAAVAAQESWAATAPRTRGEILR RAWELVQERAEDLALLMTLEMGKPLAEARGEVTYGGEFLRWFSEEAVRIHGRYGLNPEGTGQMIVSQRPVGPCYFITPWN FPFAMATRKIAPALAAGCTVVVKPPQLTPLTTLFFTGLLAEAGLPAGVVNVVTSTSSRRVSAPIIADSRLRKLSFTGSTE VGRQLIAQAADNVLRVSMELGGNAPFVVFEDADLDKAVEGALAAKFRNIGQACTAANRFIVHEQVAEEFAARVTERVAAM KIGRGTEDGVTIGPLIDDDAVAKAHELVTDATARGAVVRTGGERIDGPGSFYRPTVLTGVTEGSAILREEIFGPVLAIAT FTTEDEAVRLANNTEYGLVSYVYTRDLARGHRMIDKLETGMMGLNAGVVSNAAAPFGGVKQSGVGREGGFEGIHEFLSTK YTLIPTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-95 | 48 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-92 | 47 |
