Gene Information

Name : nfa25210 (nfa25210)
Accession : YP_118732.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Virulence
Product : iron transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2685785 - 2686831 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence :
GTGACAACCCTTGGCACCGTGCGGCGACGACGCCGCGTCGGCCTGCTGGCCCTGCTCGCGCTGCTGGCGCTGGCCGCCCT
GGCCAGCGTCGCCCTCGGCGCGCGCGCCATCGCACCCGGCACCGTCTACGAGGCGGTCGCGCACGCGCTGGGGTGCGCGG
ACGGGCCGTTCACCTGCCCGGCCGCCTCCACCACCGAGGAAATCGTGCGCGGCCTGCGGATTCCGCGCACGGCACTGGCA
CTCGTCGCGGGCCTGGCCCTCGGCGCCACCGGTGCTCTCATCCAGGGCTACACCCGCAACCCGCTCGCCGACGCGGGCCT
GCTCGGCCTCAATTCCGGCGCCGCGTTCCTCGCGGCATTGAGCGTGTACCTGTTCGCCTTCACCGACCCCGAGCAGTACA
TCTGGTTCGCGATGGCCGGCGCGCTGCTGGCCGGGCTCGCGGTGTTCGGCGCGTCCTCGCTCGGCGGCGGCAAGGCCAGT
CCGCTGAGCCTGGTGCTGGCCGGCGCCGCGATGACGGCCTTCCTCCAGGCGATGACGCAGGCGGTGGTGCTGTTCGACGC
GACCGCGCTGGACACCTACCGGTTCTGGGTGGTCGGCACGGTCGCCGGGCGCGATGCCGCGGTGTTCTGGCAGGTGCTGC
CGTTCATCGCGGTGGGCGCGGTCCTGGCGACGGCGGCGGCGCCCGGCCTGAACCTGCTCGGCCTCGGCGACGACGTCGCA
CGCGGACTCGGCATGAACATCGCCCGCAGCCGGGCGCTCGGCTTCACCGCGGTCGTGCTGCTGTGCGGCGCGGCGACCTC
GGCGGTCGGGCCGATCGCGTTCCTGGGGCTGGTCGTCCCGCACATCGCGCGGGCCTTCACCGGGCCGGACCACCGCTGGC
TCATCCCCTATTCCGCGTTGCTCGGCGCGGTGTTGCTGCTGTGCGCCGATACGCTGGGCCGGATCGTCGCACGGCCGGGT
GAGTTGCAGGTGGGCGTGATGCTGGCGGTCGTCGGCGCGCCCTACTTCATCGCCCTGGTGCGCCGCAGGAAGTTGGTGAG
CCTGTGA

Protein sequence :
MTTLGTVRRRRRVGLLALLALLALAALASVALGARAIAPGTVYEAVAHALGCADGPFTCPAASTTEEIVRGLRIPRTALA
LVAGLALGATGALIQGYTRNPLADAGLLGLNSGAAFLAALSVYLFAFTDPEQYIWFAMAGALLAGLAVFGASSLGGGKAS
PLSLVLAGAAMTAFLQAMTQAVVLFDATALDTYRFWVVGTVAGRDAAVFWQVLPFIAVGAVLATAAAPGLNLLGLGDDVA
RGLGMNIARSRALGFTAVVLLCGAATSAVGPIAFLGLVVPHIARAFTGPDHRWLIPYSALLGAVLLLCADTLGRIVARPG
ELQVGVMLAVVGAPYFIALVRRRKLVSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-17 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-17 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-17 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nfa25210 YP_118732.1 iron transporter VFG0926 Protein 7e-30 45