Gene Information

Name : nfa24500 (nfa24500)
Accession : YP_118661.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Resistance
Product : arsenite transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 2613501 - 2614601 bp
Length : 1101 bp
Strand : +
Note : -

DNA sequence :
GTGACCGCCGCGCCGGACGCGGTGGTGGGCAAGCTGTCGACACCGGACCGGTTGCTGCCGGTGTGGATCGGCGCCGCCAT
GGCAGCGGGATTGTTGCTCGGGCGGCTGGTGCCGGGACTCGGCGATGTGCTGAGCGCGATCGAGATCGACGGCATATCGC
TGCCCATCGCGGCGGGACTGCTGATCATGATGTACCCGGTGCTGGCGAAGGTGCGCTACGACCGCCTCGACACCGTCACC
GGTGATCGTCGCCTGCTGGCCGGATCGCTGCTGCTGAACTGGGTCGTGGGGCCCGCGCTGATGTTCGCACTGGCCTGGAT
CTTCCTGCCGGACCTGCCCGAGTACCGCACCGGGTTGATCATCGTCGGCCTCGCGCGCTGCATCGCGATGGTGATCATCT
GGAACGATCTGGCCTGCGGCGACCGCGAGGCCGCCGCCGTGCTCGTCGCGTTGAACTCGGTGTTCCAGGTGCTCATGTTC
GCCGTGCTCGGCTGGTTCTATCTGTCGGTCCTGCCCGGCAGGCTCGGCCTCGAGCAGGCCACCATCGACGCCTCGCCGTG
GCAGATCGCCCGCTCGGTGCTGATCTTCCTCGGCGTCCCGGTGGCGGCGGGGTACCTGACCCGGCGTCTCGGGGAGCGGG
CGAAGGGGCGCGACTGGTACGAGCGCCGGCTGCTGCCCGCGCTCGCCCCGTGGGCGCGCTACGGGCTGCTGTTCACCATC
GTCGTCCTGTTCGCCCTGCAAGGTGAACAGATCGCCGCCCAGCCGCTGGACGTGGTTCGGATCGCGCTGCCGCTGCTGGT
CTACTTCGCCCTCATGTGGGGTGGCGGCTATCTGCTCGGCGCCGCGCTCGGACTCGGTTACGCGCGCACCACCACACTGG
CGTTCACCGCCGCGGGCAACAATTTCGAACTCGCCATCGCCGTCGCCGTCGCCACCTACCGCGCCACGTCCGGCCAGGCT
CTCGCCGGTGTCGTCGGACCCCTCATCGAAGTCCCCGTCCTGGTCGCCCTGGTCTACGTCTCGCTGGCTCTGCGCCCCCG
CTTCCGCACCGGCGGGAGAACCCGGACCGCACCGGTCACCACCGACAATCCCGCCCGCTGA

Protein sequence :
MTAAPDAVVGKLSTPDRLLPVWIGAAMAAGLLLGRLVPGLGDVLSAIEIDGISLPIAAGLLIMMYPVLAKVRYDRLDTVT
GDRRLLAGSLLLNWVVGPALMFALAWIFLPDLPEYRTGLIIVGLARCIAMVIIWNDLACGDREAAAVLVALNSVFQVLMF
AVLGWFYLSVLPGRLGLEQATIDASPWQIARSVLIFLGVPVAAGYLTRRLGERAKGRDWYERRLLPALAPWARYGLLFTI
VVLFALQGEQIAAQPLDVVRIALPLLVYFALMWGGGYLLGAALGLGYARTTTLAFTAAGNNFELAIAVAVATYRATSGQA
LAGVVGPLIEVPVLVALVYVSLALRPRFRTGGRTRTAPVTTDNPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 3e-57 50
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-65 49
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 3e-65 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nfa24500 YP_118661.1 arsenite transporter BAC0573 Protein 5e-67 52
nfa24500 YP_118661.1 arsenite transporter BAC0004 Protein 6e-53 42