Gene Information

Name : nfa24420 (nfa24420)
Accession : YP_118653.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2606541 - 2607287 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGACGACCGCCGCGATCCGCGAGCCCGCGGGCCTCACCCTCGACGGCGTGCGGCTCGGTTACCGCGAACGGACCGTGCT
GGAGCGGCTCGATCTCACCGTCGCGCCGGGCGAGATCCTGGTCGTGGTCGGCAAATCCGGCTGCGGCAAGTCCAGCCTGC
TGCGCGCGCTGGCCGGGCTGCGGCCGCCGGAGGCCGGGGCGGTGCGCGCCGACGGCGAGCTCGTCACCGGGCCGTCGGCC
GACCGGGCGCTGGTGTTCCAGGACGACGCGCTGCTGCCGTGGCGCACGGCGCGGCGCAACATCGAACTGGCGCTGCGGCT
GCGCGGCGTCCCCCGACCCGAACGCCGCGAGCTCGCCTTGCGCAGGCTCGACGAGGTCGGCCTCACCGGCTACGCCGACT
ACCTGCCGCGCGACCTGTCCGGCGGCATGCGCCAGCGGGTCCAGCTCGCCCGCGCGCTGGCCGCCGCGCCGCGCGCCCTG
CTGATGGACGAGCCGTTCGGCGCGCTGGACACCCAGACCAGGGCGGGCATGCAACGACTGCTCGTCGACACCTGGCGGGC
CCATCCCACCACCGTCGTCTTCGTCACCCACGACCTCGACGAGGCGCTGCGCCTCGGTGACCGGATCGCCGTGCTCGGCC
GCGGCGCCACCGGCGCCGGCGTGCTGCGCGCCCTCGTCGAGGTGCCCGATCCGCGTACCCCCGGCGACCGCCCCGCGGTC
CGGGCCGAGATCCTGGAGCACCTGTGA

Protein sequence :
MTTAAIREPAGLTLDGVRLGYRERTVLERLDLTVAPGEILVVVGKSGCGKSSLLRALAGLRPPEAGAVRADGELVTGPSA
DRALVFQDDALLPWRTARRNIELALRLRGVPRPERRELALRRLDEVGLTGYADYLPRDLSGGMRQRVQLARALAAAPRAL
LMDEPFGALDTQTRAGMQRLLVDTWRAHPTTVVFVTHDLDEALRLGDRIAVLGRGATGAGVLRALVEVPDPRTPGDRPAV
RAEILEHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-30 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-16 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-16 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-16 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nfa24420 YP_118653.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-07 42