Name : nfa24340 (nfa24340) Accession : YP_118645.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Virulence Product : ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0803 EC number : - Position : 2599348 - 2600286 bp Length : 939 bp Strand : + Note : - DNA sequence : ATGAAGCTCGTTGCGTCTCGTGCGTTCTCCGTGCCGTGGCGGTCGGTGACGGCCGCGCTGGCCGCCTGTCTGATGGTCTC GGTCGTGGCGGCGTGCGGCGGTGCGCGCGGTGACGACGACCGGCCGACCGTGCTGACCACCTTCACCGTGCTCGCCGACA TCGCGGGCACGGTGGCGGGCGAGCACCTGCGCGTCGAATCGATCACCAAGGCCGGCGCGGAGATCCACGGGTACGAGCCG ACCCCGGGGGACATCAGGAAGGCGGCCACCGCCGACCTGATCCTGGACAACGGGCTGAACCTGGAGGCGTGGTTCGAGCA GTTCGTCGCCGAGGTGGACGTGCCGCACGCCGTCGTCAGCGAGGGCGTCGAACCGATCGACATCGCCGGCGACGCCTACC GAGGCAAGCCCAACCCGCACGCCTGGATGTCGCCGCTGAACGTGCGGATCTACGTCGACAACATGGTGCGCGCCTTCGCC GAACTCGACCCCGACCACGCCGCCGACTTCCGCGCCAACGGCGAGCGCTACAAGGCCGAACTGGACGCGGTGCACGCGGA GCTGACCGGTGCGCTGAGCGCGCTGCCCGAATCGCAGCGGGCGCTGGTGACCTGTGAGGGCGCGTTCTCCTACCTGGCCA GGGACGCCGGGCTCACCGAGAAGTACATCTGGCCGGTCAACGCCGAGCAGCAGGCCACCCCGCAGCAGATCACCTCCGCG ATCGATTTCGTCCGCGAGCGCGCCGTGCCCGCGGTGTTCTGCGAATCCACCGTCTCCGACGCGCCCATGCGGCGCGTGGT GGAGGCGACCGGCGCGGCCTTCGGCGGCGTGCTGTACGTGGACTCGCTGTCCGAACCGGACGGGCCGGTGCCCACCTACC TGGCACTGATCCGGCACGACGCGCGCACCATCGCCGATGCGCTGACAGGACGGGCGTGA Protein sequence : MKLVASRAFSVPWRSVTAALAACLMVSVVAACGGARGDDDRPTVLTTFTVLADIAGTVAGEHLRVESITKAGAEIHGYEP TPGDIRKAATADLILDNGLNLEAWFEQFVAEVDVPHAVVSEGVEPIDIAGDAYRGKPNPHAWMSPLNVRIYVDNMVRAFA ELDPDHAADFRANGERYKAELDAVHAELTGALSALPESQRALVTCEGAFSYLARDAGLTEKYIWPVNAEQQATPQQITSA IDFVRERAVPAVFCESTVSDAPMRRVVEATGAAFGGVLYVDSLSEPDGPVPTYLALIRHDARTIADALTGRA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitA | NP_457255.1 | Iron transport protein, periplasmic-binding protein | Virulence | SPI-1 | Protein | 6e-70 | 54 |
sitA | NP_806464.1 | iron transporter periplasmic-binding protein | Virulence | SPI-1 | Protein | 6e-70 | 54 |
sitA | NP_461782.1 | periplasmic binding protein | Virulence | SPI-1 | Protein | 6e-70 | 54 |
sitA | AAD41065.1 | SitA | Virulence | centisome 63 pathogenicity island | Protein | 5e-70 | 54 |
sitA | YP_217781.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 5e-70 | 52 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
nfa24340 | YP_118645.1 | ABC transporter substrate-binding protein | BAC0349 | Protein | 3e-70 | 54 |
nfa24340 | YP_118645.1 | ABC transporter substrate-binding protein | BAC0439 | Protein | 1e-66 | 52 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
nfa24340 | YP_118645.1 | ABC transporter substrate-binding protein | VFG0525 | Protein | 3e-70 | 54 |