Gene Information

Name : nfa19540 (nfa19540)
Accession : YP_118164.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2129270 - 2130100 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence :
ATGACGGCGACGAAACTCGCGGTGCGCGGGGTGCGCAGGGAATTCGCCGTGCGCGGTTCCGCGGAACGGTTCACCGCCCT
CGACGACATCACGCTCGAGGTGCGGGCGGGGGAGTTCCTCGTCCTGGTCGGGCCGAGTGGGTCCGGGAAGTCCACGCTGC
TGGATCTGCTCGGCGGATTGAGCACACCGACCGCCGGGAAGATCCTGCTCGACGACGAACCCGTCACCGGTCCGGGGCTG
GACCGCGGGATCGTCTTCCAGCAGTACGCGCTGCTGCCGTGGCGGACCGCACGGGCGAACATCGAATTCGGGCTGGAGGC
CAAGGGTGTGCGGCGCCGGGAGCGCAGGCAGATCGCCGACCGGTATCTGGACCTGGTGGGACTGACCGGATTCGGCGATC
GCTACCCGCACGAATTGTCGGGCGGGATGAAACAGCGGGTCGCGATCGCGCGCAGCCTCGCGTTCGACCCCGAAGTGCTG
CTGATGGACGAACCGTTCGCCGCGCTCGACGCCCAGACCAGGGAGTCGCTGCAGGACGAACTGCTGCGCATCTGGCGCGC
CACCGGCAAGACCATCCTGTTCATCACCCACGGCATCGACGAAGCGGTGTACCTGGGACAGCGGGTGGCGGTCCTGACCT
CCCGCCCGGGCCGGATCAAGGCCGTCGTCGATGTGGACCTCGAGCGCGAGGCCGGCGAGGACATCCGCTCCACCGAGGCG
TTCCGCGCCTACCGGCACCGGATCTGGACGCTGCTGCGCGGTGAGGTCGCCCGCGCCCAGGACGAGGAATTGACCGCCCG
CACCGACGAATCCCGAGAGGTCTCCGCATGA

Protein sequence :
MTATKLAVRGVRREFAVRGSAERFTALDDITLEVRAGEFLVLVGPSGSGKSTLLDLLGGLSTPTAGKILLDDEPVTGPGL
DRGIVFQQYALLPWRTARANIEFGLEAKGVRRRERRQIADRYLDLVGLTGFGDRYPHELSGGMKQRVAIARSLAFDPEVL
LMDEPFAALDAQTRESLQDELLRIWRATGKTILFITHGIDEAVYLGQRVAVLTSRPGRIKAVVDVDLEREAGEDIRSTEA
FRAYRHRIWTLLRGEVARAQDEELTARTDESREVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nfa19540 YP_118164.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-16 41