Gene Information

Name : glnA2 (nfa16670)
Accession : YP_117877.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1818775 - 1820211 bp
Length : 1437 bp
Strand : -
Note : -

DNA sequence :
GTGACGTTCAGCACGGCCGATGAGGTCATCCAGTACATCAAGGAGCAGGACATCGAGTACATCGATATCCGCTTCAGCGA
TCTTCCCGGTGTGCAGCAGCACTTCTCGATCCCGGCCAAGGCCTTCACCGCCGACCTCGCCGAAGAGGGTCTGGCCTTCG
ACGGCTCCTCGGTTCGTGGCTTCCAGTCGATCGACGAGTCGGACATGCTCCTGCTCCCCGACTACAGCACCGCGCGGATC
GACCCCTTCCGTGCCGCGAAGACGCTGAACATGAACTTCTTCGTGCACGACCCGTTCACCCGCGAGGCCTACTCCCGCGA
CCCGCGCAACATCGCGCGCAAGGCCGAGGAGTACCTGCGCTCGACCGGTATCGCCGACACCGCGTTCTTCGGTCCCGAAG
CCGAGTTCTACATCTTCGACTCGATCCGTTACGAGTCGAACATGAACGGCGCCTTCTACGAGATCGAGTCCATCTCCGGC
TCCTGGAACACCGGCGCGGAGTTCAACCCGGACGGCACCCTCAACCGCGGCTACAAGGTCCGCAACAAGGGCGGCTACTT
CCCCGTCGCGCCCTACGACCACTACGTCGACCTGCGCGACAAGATCTCGACCAAGCTGCAGGACGCGGGCTTCGAGCTGG
AGCGCGGCCACCACGAGGTCGGCACCGCGGGCCAGGCGGAGATCAACTACCGCTTCAACACCCTGCTGCACGCCGCCGAC
GACCTGCAGCTGTTCAAGTACATCGTGAAGAACACCGCGTGGCAGGAAGGCAAGACCGTCACCTTCATGCCGAAGCCGCT
CTTCGGTGACAACGGCTCGGGCATGCACGTGCACCAGTCGCTGTGGAAGGACGGCAAGCCGCTGTTCCACGACGAGGCCG
GCTACGGCGGCCTGTCCGACCTGGCCCGCCACTACATCGGCGGCATCCTGCACCACGCGCCGTCGCTGCTGGCGTTCACC
AACCCCACCGTGAACTCCTACCACCGCCTGGTGCCCGGCTACGAGGCCCCGATCAACCTGGTGTACTCGCAGCGCAACCG
CTCCGCGGCGGTCCGCATCCCGGTCACCGGCAACAACCCGAAGGCCAAGCGCATCGAGTTCCGCGCGCCGGACTCCTCGG
GCAACCCGTACCTGGCCTTCGCCGCCATGCTGATGGCCGGCCTGGACGGCATCAAGAAGAAGATCGAGCCGCTGGCCCCG
GTCGACAAGGACCTCTACGAGCTCCCGCCGGAGGAGGCCAAGAACATCCCGCAGGCCCCCACCAGCCTGGCCTCGGTCAT
CGACCGGCTCGAGCAGGACCACGAGTACCTCACCGAAGGCAACGTCTTCACCGAGGACCTCATCGAGACCTGGATCCAGC
TCAAGCGCGACAACGAGATCGCCCCGGTCAACCTGCGTCCGCACCCGTACGAGTTCGAGCTGTACTTCGACGTGTAA

Protein sequence :
MTFSTADEVIQYIKEQDIEYIDIRFSDLPGVQQHFSIPAKAFTADLAEEGLAFDGSSVRGFQSIDESDMLLLPDYSTARI
DPFRAAKTLNMNFFVHDPFTREAYSRDPRNIARKAEEYLRSTGIADTAFFGPEAEFYIFDSIRYESNMNGAFYEIESISG
SWNTGAEFNPDGTLNRGYKVRNKGGYFPVAPYDHYVDLRDKISTKLQDAGFELERGHHEVGTAGQAEINYRFNTLLHAAD
DLQLFKYIVKNTAWQEGKTVTFMPKPLFGDNGSGMHVHQSLWKDGKPLFHDEAGYGGLSDLARHYIGGILHHAPSLLAFT
NPTVNSYHRLVPGYEAPINLVYSQRNRSAAVRIPVTGNNPKAKRIEFRAPDSSGNPYLAFAAMLMAGLDGIKKKIEPLAP
VDKDLYELPPEEAKNIPQAPTSLASVIDRLEQDHEYLTEGNVFTEDLIETWIQLKRDNEIAPVNLRPHPYEFELYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-95 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA2 YP_117877.1 glutamine synthetase VFG1399 Protein 0.0 78