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Name : kdpB (nfa15670) Accession : YP_117777.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : potassium transporter B subunit Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1717319 - 1719373 bp Length : 2055 bp Strand : + Note : - DNA sequence : ATGACCACCGTCCTGGACCGCCCGCAGCGCGCGGCTCACCCGGCGTTCGCGCCGCGGCAGCTCGCCGGCGCGTTGCCGGG CGCGCTGACCAAACTCGACCCACGGCGCATGGCGCGCAATCCGGTGATGTTCGTGGTGTTCGTCGGATCGGTGATCACCA CGCTCGCCGCCGTCGCCGAACCCAGCGTGTTCGGCTGGTCGATCGCGGCGTGGCTGTGGTTCACCGTGCTGTTCGCCAAC CTGGCCGAAGCGGTGGCAGAGGGCCGCGGCAAAGCCCAGGCCGAGACGCTGCGCCGGACCAAGCGGGAGATGACCGCCCG CCGCCTGGGCGGCGACGGCGAGGAGCGGGTGCCCGCCACCGACCTGCGTGTGGGAGACCGGGTGGTCGTCGAAGCGGGCG AGCTGATCCCCGGTGACGGCGACGTGATCGACGGTATCGCCGCGGTGGACGAATCCGCGATCACCGGCGAATCCGCCCCG GTGATCCGGGAATCCGGCGGCGACCGTTGCGCCGTCACCGGCGGGACCACCGTGCTGTCGGACCGGATCGTCGTGCGGAT CACCGCGGCACCGGGACAGACCTTCGTCGACCGGATGATCGCCCTCGTCGAGGGCGCCGCTCGGCAGAAGACCCCCAACG AGATCGCGCTGAACATCCTGCTGGCCGCGCTGACCGTCGTGTTCCTGCTCGCCGTCGTCGCGCTCGGCCCGATGAGCGCC TACGCGGGCGCCGAGCGGGGCCCGGTCGAGCTGATCGCGCTGCTGGTCTGCCTGATCCCGACCACCATCGGGGCGCTGCT CTCGGCGATCGGCATCGCCGGGATGGACCGGCTGGTGCGGCGCAACGTGCTGGCCACGTCGGGCCGCGCGGTCGAGGCGG CAGGCGATATCGACACCCTGCTGCTGGACAAGACCGGCACCGTCACCTTCGGCAACCGCCGCGCCACCGCGCTGCACCCG GCGCCGGGCGTCACGGCGAGCGAGCTGGCCGCCGCGGCGCGGCTGTCGAGCCTGGCCGACGGCACGCCCGAAGGCCGCAG CATCGTCGACCTGTGCGCCGCGGACCACGGCCTGCCGACACTGCCGAGCGCCGACGAGGGCCGCGCCGAATTCGTCGCCT TCAGCGCCCACACGCGGATGAGCGGACTCGATCTCGACAGCGCGCGGATCCGCAAGGGCGCCGCCGACGCGGTGACGGCG TGGGTGCGCGAACAGGGCGGGCAGCTCGCCGACGCGGTGACCGAGACCGTCGACCGGATCGCCCGCGGCGGCGGCACCCC GCTGGTCGTCGCGCGCGCCGACGGCGTGGACGCGGCCGTGCTCGGCGTCGTCGAACTGTCCGACGTGGTGAAACCCGGTA TGGCCGAACGATTCGCCCGGCTGCGCACGATGGGCATCCGCACCGTGATGGTCACCGGCGACAACCCGCTCACGGCGCGG GCCATCGCCGCCGCGGCCGGGGTCGACGACTTCCTCGCCGAGGCCACCCCGGAGGACAAGCTGGCGTTGATCCGCACCGA GCAGGCCGCGGGCAGGCTGGTCGCGATGACCGGCGACGGCACCAACGACGCGCCCGCACTGGCCCGCGCCGACGTGGGCG TGGCCATGAACTCCGGCACCTCCGCGGCCAAGGAGGCGGGCAACATGGTCGATCTCGACTCCGATCCCACCAAGCTGATC GAGGTCGTCGAGATCGGCAAGCAGCTGCTCATCACCCGCGGTGCGCTCACCACGTTCTCGCTGGCCAACGACCTGGCCAA GTACTTCGCGATCCTGCCCGCGCTGTTCAGCGGCGTCTACCCGCAGCTGGCGGCGCTGAACATCCTGGGGCTGGCCACGG CGCAGTCGGCGATCCTGTCCTCGGTGATCTTCAACGCGCTGGTGATCGTGGCGCTGATCCCCTTGGCGCTCAAAGGGGTT CGCTATCGGCCGGCGAGCGCTTCGGCTCTGCTCGGGCGCAATCTGCTCATCTACGGCGTCGGCGGGGTGATCACCCCGTT CCTCGGGATCCCCCTGATCGATCTCGTCGTCCGCCACATACCGGGAATCGGGTGA Protein sequence : MTTVLDRPQRAAHPAFAPRQLAGALPGALTKLDPRRMARNPVMFVVFVGSVITTLAAVAEPSVFGWSIAAWLWFTVLFAN LAEAVAEGRGKAQAETLRRTKREMTARRLGGDGEERVPATDLRVGDRVVVEAGELIPGDGDVIDGIAAVDESAITGESAP VIRESGGDRCAVTGGTTVLSDRIVVRITAAPGQTFVDRMIALVEGAARQKTPNEIALNILLAALTVVFLLAVVALGPMSA YAGAERGPVELIALLVCLIPTTIGALLSAIGIAGMDRLVRRNVLATSGRAVEAAGDIDTLLLDKTGTVTFGNRRATALHP APGVTASELAAAARLSSLADGTPEGRSIVDLCAADHGLPTLPSADEGRAEFVAFSAHTRMSGLDLDSARIRKGAADAVTA WVREQGGQLADAVTETVDRIARGGGTPLVVARADGVDAAVLGVVELSDVVKPGMAERFARLRTMGIRTVMVTGDNPLTAR AIAAAAGVDDFLAEATPEDKLALIRTEQAAGRLVAMTGDGTNDAPALARADVGVAMNSGTSAAKEAGNMVDLDSDPTKLI EVVEIGKQLLITRGALTTFSLANDLAKYFAILPALFSGVYPQLAALNILGLATAQSAILSSVIFNALVIVALIPLALKGV RYRPASASALLGRNLLIYGVGGVITPFLGIPLIDLVVRHIPGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 8e-147 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 6e-147 | 59 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-128 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-128 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-128 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-128 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 8e-129 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-129 | 54 |
