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Name : serS (nfa1400) Accession : YP_116346.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 127645 - 128907 bp Length : 1263 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGACCTCCGACTCCTGCGGGAGGACCCCGACGCGGTGCGCGCCTCGCAGCGTGCCCGCGGCGAAGACCCCGCCCT CGTCGACGCACTGCTCGAGGCGGACGCGGCCCGGCGTGCGGCGGTCGCCACCGCCGACAATCTGCGCGCCGAGCAGAAGG CGATGAGCAAACAGATCGGGAAGGCGCCCAAGGAGGAGCGATCCGCGCTGCTGGCGCGCGCGCAGGAGCTGTCGGTCAAG GTCAAGGAGGCCGAAGCCGCCCAGCACGCGGCCGACGCCGATCTCGACGCCGCGCATCGCGCGCTGTCGAACGTGGTGCT GCCCGCCGTTCCGGCCGGTGGCGAGGACGACTACGTCGTGCTCGAGACCGTGGGCACCCCGCCGGAGTTCGACTTCGAGC CCAAGGACCACCTCGAACTCGGCGAGGCGCTCGGCCTGATGGACATGGAGCGCGGCGCCAAGGTCTCCGGCTCGCGCTTC TACTTCCTCACCGGCCACGGCGCGCTGCTGCAACTGGGCCTGCTGCAACTGGCCGCGCAGAAGGCGGTCGCCAACGGCTT CACCATGATGATCCCGCCGGTGCTGGTGCGCCCGGAGGTGATGGCGGGCACCGGCTTCCTCGGCAGGCACGCCGCGGAGG TCTACCACCTCGCCGACGACGACATGTACCTGGTCGGCACCTCGGAGGTGCCGCTGGCCGGCTACCACGCCGACGAGATC CTCGACCTCAGCGCCGGTCCCAAGCGCTACGCGGGCTGGTCGTCGTGCTTCCGCCGCGAGGCGGGCAGCTACGGCAAGGA CACCCGCGGCATCATCCGGGTGCATCAGTTCGACAAGGTCGAGATGTTCGTCTACACCACGCCCGACCAGGCCGAGGCCG AGCACGAGCGGCTGCTGGCCTGGGAGCGGGAAATGCTGGCCGCGATCGAGGTGCCCTACCGCATCATCGACGTGGCGGCG GGCGATCTGGGCAGCTCGGCGGCGCGCAAGTTCGACTGCGAAGCCTGGGTGCCGAGCCAGCAGACCTACCGGGAACTGAC CTCGACCTCCAACTGCACCACCTTCCAGGCCCGCAGGCTGTCGGTGCGCTACCGCGACGAGAACGGGAAACCCCAGATCG CGGCGACCCTGAACGGCACGCTGGCCACCACCCGGTGGATCGTGGCGATCCTGGAGAACCATCAGCGGGCCGACGGGTCG GTGCGGGTGCCCGCCGCGCTGGTGCCGTTCGTCGGCACCGATGTGCTGCGGCCACCGGCCTGA Protein sequence : MIDLRLLREDPDAVRASQRARGEDPALVDALLEADAARRAAVATADNLRAEQKAMSKQIGKAPKEERSALLARAQELSVK VKEAEAAQHAADADLDAAHRALSNVVLPAVPAGGEDDYVVLETVGTPPEFDFEPKDHLELGEALGLMDMERGAKVSGSRF YFLTGHGALLQLGLLQLAAQKAVANGFTMMIPPVLVRPEVMAGTGFLGRHAAEVYHLADDDMYLVGTSEVPLAGYHADEI LDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYTTPDQAEAEHERLLAWEREMLAAIEVPYRIIDVAA GDLGSSAARKFDCEAWVPSQQTYRELTSTSNCTTFQARRLSVRYRDENGKPQIAATLNGTLATTRWIVAILENHQRADGS VRVPAALVPFVGTDVLRPPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-58 | 43 |
