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Name : nfa12040 (nfa12040) Accession : YP_117413.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1334892 - 1336415 bp Length : 1524 bp Strand : + Note : - DNA sequence : GTGACCGTGACCGACACGCTTTCCGAGGCGTCCGCCTCGACGCTGACCCCCGTTCTGCCCCAGGTGCGCGACTGGCTCGC CCGCCCCAAGCAGTTGTTCATCGGCGGCCGGTGGGTGGACGCCGCCTCGGGCCGGAGCTTCGAGACCGTCGACCCGGCCA CCGGGCAGGTGCTGACCACCGTCGCGCACGGCGGCGCCGAGGATGTCGACCGCGCGGTGCGCGCCGCCCGCACCGCGTTC GAGGGTGAATGGTCGCTGTGGACGCCCGCGCAGCGCCAGCGGCTGCTGTTCCGGATCGGCGAGGCCATCTTCGAGCACGC CGAGGAACTGGCGCAGCTGGAATCGCTGGACAACGGCAAGTCCGCCGCGGTCGCCCAGGCGGTGGACATCACCTGGGTCG CCGAACTGTTCCAGTACTACGCGGGCTGGGCCACCAAGATCGAGGGCCGGACCATTCCGGTGTCGATGCCGTGGGCGCCG GGCACCCAGTGGCACGCCTACACGCTGCGCGAGCCGGTCGGCGTCTGCGGGGCGATCACGCCGTGGAACTTCCCGCTGCT GATGGTGGCCTTCAAGCTGCCGGTGGCGCTGGCGTGCGGCAACACCATCGTCGTCAAGCCCGCCGAGCAGACCCCGCTGA CCACGCTGCGCCTGGCCGAGATCATGGTCGAGGCCGGGCTGCCCGACGGCGTGCTCAACGTGGTGACCGGCTACGGCGAC GCCGGTGCGGCGCTGGCCGGACACCTGGACGTGGACAAGATCGCCTTCACCGGCTCCACCGAGGTGGGCAAGCTGATCGT GGACGCGGCCAAGGGCAACCTCAAGCGCGTCACCCTGGAACTGGGCGGCAAGAGCCCGCAGGTCGTGTTCGCCGACGCGG ATCTGGACCTCGCGGTGCCCGGGGTGGCCTCGGGCTTCCTGTTCAACCACGGCCAGACCTGCACCAGCGGCACCCGGATC CTGGTGGAGCGCGGCATCTTCGACGAGTTCACCCAGCGCGTCGCCGACATCGCCGCGGCCAGCAAGCTCGGCCCCGGCCT CGACCCGACCACCGAGGTGGGCCCGCTGGTCTCGCAGGAGCAGCTCGAGCGGGTGACCGGCTACATCGACCAGGGCCTGC GCGACGGCGCCCGTGCCCTGTGCGGTGGGCGCAGGCACGGCGACTCCGGGTTCTACGTGGAGCCGACGGTGCTGGTGGAC GTGCAGTCCTCCTTCAGCGTGTACCGGGAGGAGATCTTCGGCCCGGTCGTGGTCGCCACCCCGTTCGACGCCGAGGACGG TGTCGCGGCCGCGGCCAACGACACCCCCTACGGCCTGGCCGCGAGCGTGTGGACCCGCGACATCTCCAAGGCGCACCGCA CCGCCCGGCAGATCAAGGCGGGCACCGTGTGGGTGAACGCGCACAACGCCTTCGACGCGGCGCTGCCGTTCGGCGGCTAC AAGCAGTCCGGCTGGGGCCGCGAACTCGGCGCCTCCGCCATCGACGCCTACACCGAGCAGAAGACGATCAACGCGCAGTT GTGA Protein sequence : MTVTDTLSEASASTLTPVLPQVRDWLARPKQLFIGGRWVDAASGRSFETVDPATGQVLTTVAHGGAEDVDRAVRAARTAF EGEWSLWTPAQRQRLLFRIGEAIFEHAEELAQLESLDNGKSAAVAQAVDITWVAELFQYYAGWATKIEGRTIPVSMPWAP GTQWHAYTLREPVGVCGAITPWNFPLLMVAFKLPVALACGNTIVVKPAEQTPLTTLRLAEIMVEAGLPDGVLNVVTGYGD AGAALAGHLDVDKIAFTGSTEVGKLIVDAAKGNLKRVTLELGGKSPQVVFADADLDLAVPGVASGFLFNHGQTCTSGTRI LVERGIFDEFTQRVADIAAASKLGPGLDPTTEVGPLVSQEQLERVTGYIDQGLRDGARALCGGRRHGDSGFYVEPTVLVD VQSSFSVYREEIFGPVVVATPFDAEDGVAAAANDTPYGLAASVWTRDISKAHRTARQIKAGTVWVNAHNAFDAALPFGGY KQSGWGRELGASAIDAYTEQKTINAQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-75 | 46 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-69 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 3e-69 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-73 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-73 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-73 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-72 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| nfa12040 | YP_117413.1 | aldehyde dehydrogenase | VFG0082 | Protein | 6e-70 | 42 |
