Gene Information

Name : nfa10960 (nfa10960)
Accession : YP_117305.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Unknown
Product : deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 1211754 - 1212374 bp
Length : 621 bp
Strand : +
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
GTGACGATGGCGCGCGTCCTGGTCGCCAGCCGTAACGCCAAGAAGCTGGCCGAGTTGCGCCGCATCCTCGACGACGCCGG
GGTGGCGGGGGTGCAGATCGTCGGGCTCGACGACGTGCCGCCCTACGACGAGGCGCCCGAGACCGGCGCCACCTTCGAGG
AGAACGCGCTCGCCAAGGCGCGCGACGGCGCCGCCGCGACCGGATTGCCCTGTGTCGCCGACGATTCCGGCCTCGCCGTG
GACGCGCTCAACGGGATGCCCGGCGTGCTGTCGGCGCGCTGGTCGGGCACCCACGGCGACGACGCGGCCAACAACGCGCT
GTTGCTCGCCCAGTTGCGCGACGTGCCCGACGAGCGCCGCGGCGCGCGCTTCGTCTCCGCGTGCGCGCTGGTGGTGCCCG
GCGGTACCGAGACCGTGGTGCGCGGCGAATGGCCCGGGACGATCGGCCGGAAACCGATGGGGGAGGGCGGTTTCGGGTAC
GACCCGCTGTTCGTGCCGGACGGCGGCGACGTCACCGCCGCCCAGCTGACACCCGCGGCCAAGGACGCGGCCTCGCACCG
CGGCCGCGCCCTGCGCCACCTGCTTCCGGCCCTGGCCGCCCTCGCCGACCGAACGGAGTGA

Protein sequence :
MTMARVLVASRNAKKLAELRRILDDAGVAGVQIVGLDDVPPYDEAPETGATFEENALAKARDGAAATGLPCVADDSGLAV
DALNGMPGVLSARWSGTHGDDAANNALLLAQLRDVPDERRGARFVSACALVVPGGTETVVRGEWPGTIGRKPMGEGGFGY
DPLFVPDGGDVTAAQLTPAAKDAASHRGRALRHLLPALAALADRTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 1e-44 63