|
Name : rph (nfa10950) Accession : YP_117304.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 1210984 - 1211757 bp Length : 774 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : GTGTCGAGACGAGCCGATGGCAGGGCGGACGATGAGCTCCGCGAGGTAAGGATCACCCGTGGATTCACCACGCATCCAGC CGGTTCCGTGCTGGTCGAGTTCGGGCAGACCCGGGTGATGTGCACCGCCAGCGTGACCGAAGGGGTGCCCGCCTGGCGGC GCGACTCCGGGCTGGGCTGGCTCACCGCCGAATACGCGATGTTGCCCGCGGCCACCCACACCCGCTCCGGCCGTGAGTCG GTCAAGGGGCGCGTGGGCGGGCGCACCCAGGAGATCAGCAGGCTGGTCGGGCGCTCGTTGCGGGCCTGCATCGACCTGGC CGCGATCGGGGAGAACACCATCGCCATCGACTGCGATGTGCTGCAGGCCGACGGTGGCACCAGGACCGCCGCCATCACCG GTGCCTACGTGGCACTCGCCGACGCGGTCACCTGGCTGGGCGCGGCGGGGGCGCTGGCCGATCCGCAGCCGATCTCGTGC GCCATCGCCGCGGTGAGCGTCGGCGTGGTGGACGGCCGGGTGCGGCTGGACCTGCCGTACGAGGAGGACTCGCGCGCCGA GGTCGACATGAACGTGGTCGCCACCGACACCGGCACCCTGGTCGAGATCCAGGGCACCGGCGAGGGCGCCACCTTCCCGC GGTCGACGCTGGACAAGCTGCTCGATGCCGCGCTGGCCGGCTGCGAGCAGTTGTTCGCGGTGCAGAAGGAGGCGCTGGCG CTGCCGTATCCGGGTGTGCTGCCCGAGCCCGCCGAACCGGCGAAACGGAAGTGA Protein sequence : MSRRADGRADDELREVRITRGFTTHPAGSVLVEFGQTRVMCTASVTEGVPAWRRDSGLGWLTAEYAMLPAATHTRSGRES VKGRVGGRTQEISRLVGRSLRACIDLAAIGENTIAIDCDVLQADGGTRTAAITGAYVALADAVTWLGAAGALADPQPISC AIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVATDTGTLVEIQGTGEGATFPRSTLDKLLDAALAGCEQLFAVQKEALA LPYPGVLPEPAEPAKRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 8e-71 | 68 |
