|
Name : BPSS0092 (BPSS0092) Accession : YP_110115.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Virulence Product : fimbria-related chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 110792 - 111529 bp Length : 738 bp Strand : + Note : Similar to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 3.4e-36, 45.04% id in 242 aa, and to Bordetella pertussis chaperone protein precursor FimB or FhaD SWALL:FIMB_BORPE (SWALL:P3 DNA sequence : GTGCGGTTATGGAAAATGTGCGTCGCCGTGGCGGCGGCGTGTTGTCTGGCTTCGACCTTGTCCCAGGCGGCGATCGTCAT CACCGGAACCCGCGTCGTCTATCCGGAAAGCAGTCGCGAGGTCAACGTTCGGCTCAACAACGTCGAGCAGTCGCCGGTAT TGGTGCAGGCGTGGATCGATGACGGAAATGCGGGCGCAAGCCCGGACGAGATCAAGGTGCCGTTCGTTCTCATGCCGCCC GTGTTTCGCGTCGAACCGAAGAAGGGGCAAACGCTGCGCGTCATGTACACGGGCGACGATCTGCCGAAGGACCGCGAATC CGTGTACTGGCTGAACGTCCTGGAAATTCCTCCAAAGCCGACCGTCGAAGCCGAGCAGAACCTCTTGCAGCTCGCGTTCC GCACGCGCATCAAACTGTTTTTCCGTCCGTCTGCGTTGGAGGACGGAAACGCGGCGCAGGCGCGCGATCAGCTCAAATGG AAGATCGTGCGCAACGAAAAGGGCGTGAGCGTGCTGCGTGCGGAGAATCGTTCTCCTTATTACATCTCGATAAGCCAGGC GACCGCGAAAAGCGGCGACAAGAGCGTGCAGTTCGATCCGGGCATGGTCCCTCCGTTCGGCAGCAAGGAATTCGTGAGCA AGCGTGACATCTCGACGCTGTCCACGCATGCCGAGATTGCCTACAAGCTGCTCAATGACTATGGGGCGGAAGTGGCGGGC TCGGCAACCGCGGAATAA Protein sequence : MRLWKMCVAVAAACCLASTLSQAAIVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPP VFRVEPKKGQTLRVMYTGDDLPKDRESVYWLNVLEIPPKPTVEAEQNLLQLAFRTRIKLFFRPSALEDGNAAQARDQLKW KIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDPGMVPPFGSKEFVSKRDISTLSTHAEIAYKLLNDYGAEVAG SATAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ecpD1 | AAO49832.1 | pilin chaperone ecpD1 | Not tested | SPI-3 | Protein | 8e-46 | 46 |
| unnamed | CAD33727.1 | putative F17-like fimbrial chaperone | Virulence | PAI I 536 | Protein | 2e-39 | 41 |
| cupD2 | AAP84170.1 | putative pili assembly chaperone | Not tested | PAPI-1 | Protein | 9e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPSS0092 | YP_110115.1 | fimbria-related chaperone | VFG0007 | Protein | 4e-38 | 44 |
| BPSS0092 | YP_110115.1 | fimbria-related chaperone | VFG1145 | Protein | 4e-35 | 42 |
| BPSS0092 | YP_110115.1 | fimbria-related chaperone | VFG1468 | Protein | 1e-39 | 41 |
