|
Name : BPSS0853 (BPSS0853) Accession : YP_110865.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Unknown Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 1143269 - 1144201 bp Length : 933 bp Strand : - Note : Similar to Escherichia coli ribokinase RbsK SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) fasta scores: E(): 2.4e-26, 34.65% id in 303 aa, and to Agrobacterium tumefaciens ribokinase ATU4847 or AGR_L_78 SWALL:Q8U6G0 (EMBL:AE009413) (312 aa) fasta scores: E(): DNA sequence : ATGGAGACGATCGCCGTCATCGGCAGCAACATGGTCGATCTCGTGACCTACGTCACGCGGATGCCCGCCGACGGAGAAAC GCTCGAAGCGCCGAACTTCGAGCTCGGCTGCGGCGGCAAGGGCGCGAACCAGGCGGTTGCCGCGTCGAAGCTGGGCGCGC GCGTCGCGATGATATCGAAGCTCGGCGACGACCTGTTCGCCGAGAACACGCTGCGCAACTTCGAGCGCTTCGGCGTCGAT ACCGAGCACGTGCGCCGCGTGAGCGGCGTATCGAGCGGCGTCGCGCCGATTTTCGTGAGCCCCGATTCGCGCAACCGCAT CCTGATCGTCAAGGGTGCGAACCGGCATCTGAGGCCGGCCGACATCGACGCGGCCGCCGCGAAAATCGAGGCGAGCCGCC TCGTCGTGCTGCAACTCGAGATCGACATCGATACGGTCTACTACGCAATCGATTTCGCCGCCGCCCGCGGCATTCCGGTG CTGCTGAATCCCGCGCCGGGCGTCCCGGATCTCGATTTCGCGCGCCTCGCGAAGCTCGAGTTCCTCGTGCCGAACGAGAC CGAGCTCGCGCTCGTGTCCGGCATGCCGACCGACACGCCCGACGCCGTCGAGCGCGCGGCGGGCTCGCTCGTCGAGCGCG GCGTGAAGCACGTGATCGTCACGCTAGGCGAGAAGGGCTCGCTCCTCGTGTCGCGCGCGGGCGCCGTGCGCGTGCCGCCC GTTGCCGTCGACGCGCGCGACACGACAGGCGCGGGCGACGCGTACATCGGCTGCTTCGCGCGCCACTATGTCGCAACGGC CGACATACCCGCCGCGATGCGGCTCGCCTCCGCGTACGCCGCGCACTCGGTGACGGGCCTCGGCACGCAGAAGTCGTACG CGGATGCCGCGACGTTCGAGCGCTTCCTGCAGACGATCGGCTTCGGCGCGTGA Protein sequence : METIAVIGSNMVDLVTYVTRMPADGETLEAPNFELGCGGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVD TEHVRRVSGVSSGVAPIFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIDIDTVYYAIDFAAARGIPV LLNPAPGVPDLDFARLAKLEFLVPNETELALVSGMPTDTPDAVERAAGSLVERGVKHVIVTLGEKGSLLVSRAGAVRVPP VAVDARDTTGAGDAYIGCFARHYVATADIPAAMRLASAYAAHSVTGLGTQKSYADAATFERFLQTIGFGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoK | ADD91722.1 | deoxyribokinase DeoK | Not tested | PAI-I AL862 | Protein | 5e-66 | 56 |
| unnamed | CAE85173.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 7e-66 | 56 |
| ORF4 | AAK27331.1 | unknown | Not tested | PAI-I AL862 | Protein | 2e-60 | 54 |
