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Name : BPSS0338 (BPSS0338) Accession : YP_110358.2 Strain : Genome accession: NC_006351 Putative virulence/resistance : Unknown Product : insertion element protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3547 EC number : - Position : 469303 - 470583 bp Length : 1281 bp Strand : - Note : Similar to Shigella flexneri transposase for IS110 s0128 SWALL:Q9AFS5 (EMBL:AF348706) (398 aa) fasta scores: E(): 3e-111, 76.73% id in 404 aa, and to Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SWALL:YIS1_STRCO (SWALL:P19 DNA sequence : ATGCCGAGACTTGCCACCGTTGTTGCAGGCCGATCCGTTCACTCTGCACAAACCGCGATGCAAGAAGCCACACAACATGA CGCCGTCGATGTCTTCGTCGGCGTCGACGTCGATGTCGGCGTCGACGTCGGTAAAGGCCAGCATCACGCCGTCGCACTCG ATCGAAACGGCAAGCGTCTTTACAACAAGGCACTCCCCAACGACGAGGTCAAGCTGCGCGCCCTCATCGCCGAACTCAAG ACTCACCGTCGACTGCTGTTCGTCGTCGATCAGCCTTCCACCATCGGTGCGCTTCCTGTAGCCGTCGCCCGCGCTGAAGG CGTACTCGTCGCCTATCTGCCCGGACTGGCCATGCGCCGCATCGCTGATTTGCATGCCGGCGAAGCCAAGACCGATGCCC GCGACGCCGCGATCATTGCTGAAGCCGCCCGCTCGATGCCACATACGCTGCGCTCGCTTCGACTGGCCGACGAGCAGCTC GCCGAACTCACCATGCTCCGCGGCTTCGATGACGACCTCGCCGCTCAGCTCACGCAAACCAGCAACCGCATTCGCGGCCT GCTTACTCAAATCCATCCGGCGCTCGAACGCGTTCTCGGACCGCGCCTCGACCATCCGGCGGTGCTCGATCTGCTTGAGC GCTACCCGTCCCCGAGCGCACTGGCTGCTGCCAATGAAAAGACGCTCGCCAACCGCCTGACCAAGCTCGCACCGCGCATG GGCAAGAACTGGGCGGCCGAAATCGTTCAAGCGCTGAACGAGCAAGCCGTGATCGTGCCCGGCACGCAGGCCGCCACCAT CGTCATGCCTCGTTTGGCCCAGCAACTTGCCGCCTTGCGCAAGCAGCGTGACGAAATCGCTGCCGAAGTTGAGCGGCTGG TGCTTGCTCACCCTTTTTGGCCGGTCCTGACCAGCATGCCGGGAGTCGGCGTCAGGACCGCTGCCAGACGCCTGACCGAA GCCGCCCAAAAAGCCTTCGCCACGGCCGCTCATCTGGCGGCCTACGCTGGCCTCGCGCCGGTCACCCGGCGCTCAGGCTC GTCGATCCGGGGTGAACACCCGTCCAGACGGGGCAACAAGGTGCTCAAACGCGCCTTGTTCCTCTCCGCCTTCGCTGCCT TACGAGACCCAGTCTCACGGGCCTATTCCTCGCGCAAGATCCAGCAGGGCAAGCGCCACAACCAAGCACTCATCGCGCTC GCACGGCGACGCTGCGACGTCCTGTTTGCCATGCTGCGCGACGGCACCATTTACCCACCCAAGTCAGCCCCTGACGCTTG A Protein sequence : MPRLATVVAGRSVHSAQTAMQEATQHDAVDVFVGVDVDVGVDVGKGQHHAVALDRNGKRLYNKALPNDEVKLRALIAELK THRRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQL AELTMLRGFDDDLAAQLTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPSALAAANEKTLANRLTKLAPRM GKNWAAEIVQALNEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPFWPVLTSMPGVGVRTAARRLTE AAQKAFATAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYSSRKIQQGKRHNQALIAL ARRRCDVLFAMLRDGTIYPPKSAPDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| s0055 | CAD33753.1 | putative IS110 transposase | Not tested | PAI I 536 | Protein | 2e-121 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPSS0338 | YP_110358.2 | insertion element protein | VFG1494 | Protein | 1e-121 | 80 |
