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Name : gabD (BPSS0280) Accession : YP_110300.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 374061 - 375530 bp Length : 1470 bp Strand : - Note : Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 1.4e-130, 69.7% id in 482 aa, and to Salmonella typhi succinate-semialdehyde dehydrogenase sty2911 SWALL:Q8Z DNA sequence : ATGACTACAGCTCACGAAACCCTTGCACTGAAAGATCCCGCGCTGTTGCGCGAGCGCGCGTTCGTCGCGGGCGAATGGCA AGCCGCCGACGGCGGCGCGACGCTCGAGGTCCGCAACCCGGCGACGGGCGCGCTGATCGGCACGGTGCCCGCGATGGGCG CGGCCGAGACGCGCCGCGCGATCGACGCGGCGAACGCCGCGTGGCCCGCCTGGCGCAAGAAGACCGCGAAGGAGCGCGCG GCGATCCTGCGCAAGTGGCACGATCTGATGATCGCGCACGCGGACGATCTCGCGCTGATCCTGACGACCGAGCAGGGCAA GCCACTCGTCGAGGCAAAGGGCGAGATCGGCTATGCGGCATCGTTCCTCGAATGGTTCGCCGAGGAAGGCAAGCGCGTGT ACGGCGATACGATCCCGACGCCCGCCGCCGACAAGCGGATCGTCGTGACGAAGGAGCCGGTGGGCGTGTGCGCGGCGATC ACGCCGTGGAACTTCCCGGCGGCGATGATCACGCGCAAGGTCGGCCCGGCGCTCGCGGCCGGTTGCCCGATCGTCGTGAA GCCGGCCGAGGCCACGCCGTTCTCGGCGCTCGCGATGGCGGTGCTCGCCGAGCGCGCGGGCGTGCCGGCCGGCGTGTTCA GCGTCGTCACGGGCGAGCCGAAGGCGATCGGCGGCGAACTCACGTCGAACCCGATCGTGCGCAAGCTGTCGTTCACCGGC TCGACGCCGGTCGGACGCCTGCTGATGGCGCAATGCGCGGCGACGGTCAAGAAGGTGTCGCTCGAGCTCGGCGGCAACGC GCCGTTCATCGTGTTCGACGACGCGGATCTCGATGCGGCCGTCGAGGGCGCGATCGCATCGAAGTACCGCAACAGCGGGC AGACCTGCGTCTGCACGAACCGCTTCTACGTGCACGAGAAGGTCTACGACGCGTTCGCCGAGAAGCTGACCGCGGCCGTC GCGAAGCTGAAGGTCGGGCCCGGCACCGAGGCCGGCGTCGTGCAGGGCCCGCTCATCAACGGCGCGGCGGTGCGCAAGGT CGAAGCGCACATCGCCGACGCGCTCGACAAGGGCGCGCGCGTGACGACGGGCGGCCAGCGCCACCCGCTCGGCCACGGTT TCTTCGAGCCGACCGTGCTGACGGGCGTCACGCCCGACATGAAGGTCGCGAAGGAGGAAACGTTCGGCCCGCTCGCGCCG CTGTTCAGGTTCTCGACCGAGGAAGAAGCGATCCGCTACGCGAACGACACCGAGTTCGGCCTCGCCGCGTACTTCTACAG CCGCGACATCGGCCGCGTGTGGCGCGTGGCCGAGGCGCTCGAATACGGGATGGTCGGCATCAACGCCGGAATCATCTCGA ACGAGGTCGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTCGGCCGCGAGGGCTCGCACTACGGGATCGACGATTACGTC GTGATCAAGTACATGTGCGTCGCGGTGTGA Protein sequence : MTTAHETLALKDPALLRERAFVAGEWQAADGGATLEVRNPATGALIGTVPAMGAAETRRAIDAANAAWPAWRKKTAKERA AILRKWHDLMIAHADDLALILTTEQGKPLVEAKGEIGYAASFLEWFAEEGKRVYGDTIPTPAADKRIVVTKEPVGVCAAI TPWNFPAAMITRKVGPALAAGCPIVVKPAEATPFSALAMAVLAERAGVPAGVFSVVTGEPKAIGGELTSNPIVRKLSFTG STPVGRLLMAQCAATVKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNSGQTCVCTNRFYVHEKVYDAFAEKLTAAV AKLKVGPGTEAGVVQGPLINGAAVRKVEAHIADALDKGARVTTGGQRHPLGHGFFEPTVLTGVTPDMKVAKEETFGPLAP LFRFSTEEEAIRYANDTEFGLAAYFYSRDIGRVWRVAEALEYGMVGINAGIISNEVAPFGGVKQSGLGREGSHYGIDDYV VIKYMCVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-150 | 67 |
