Gene Information

Name : BPSS2096 (BPSS2096)
Accession : YP_112095.1
Strain :
Genome accession: NC_006351
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 2837548 - 2839419 bp
Length : 1872 bp
Strand : -
Note : Similar to Pseudomonas aeruginosa hypothetical protein pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 4.4e-110, 47.77% id in 628 aa, and to Xanthomonas axonopodis hypothetical protein xac4142 SWALL:AAM38977 (EMBL:AE012064) (627 aa) fasta

DNA sequence :
ATGGATACGCGCCTGCTCGACTACTACAACCGCGAGCTCGCGTATCTGCGCGAGTTGGGCGGCGAGTTCGCGCAGCAGTT
TCCGAAAGTGGCCGCGCGCCTGCGGATGCACGAATCGGGGCCGCCCGATCCGTACGTCGAGCGGCTGCTCGAAGGCTTCA
GCTTTCTCACCGCGCGCGTGCAACTGAAGATGGACGCGGAGTTTCCGCGCTTCACGCAGGCGCTGCTCGACGCGGTGTAT
CCGGGTTACGTCGCGCCGCTTCCGTCGATGGCGATCGTGCAGTTCACGCCGATGATGAACGAAGGCAGCCTCGCGCAGGG
CTACCGGCTGCCGGCGGGCACCGCGCTGCGCGCGCGGCCCGCCGCGGCCGAACAGACCGCGTGCGAGTTTCGCACCGCGC
ACGATCTGACGCTGTGGCCGCTGGAGCTCGCGGGCGCTTCGGTGACGGGCGCGCCCGCGTATCTGCCGCGTTCGGCGACG
GCCGCGCGCCGCGACGTGCGCGGCGCGCTGCGCATCCGGCTGAAGGCGCGCGGCGGCGCGGGCCTCGCGCAACTGCCGAT
CGATCGGCTGATGTTCCACCTGGCGGGCCCCGAGCGCGACGCGCTGCATCTGCTCGAACTGATCGCCGGGCATACGATCG
GCGTCGTCTGCCACGACGCGGCGCAGCCGCCGCGCTGGCTGCACGCGCTCGGCGCGCACGCGCTCGCGCATCAGGGCTTC
GACGCCGATCAGGCGCTGCTGCCCGACGAAGGCCGCAGCTTCCACGGTTACCGGCTGCTGCGCGAGTACTTCGCGTTTCC
CGCGCGCTTCCTGTTCTTCAGCATCGAAGGATTGCGGCCCGCGCTCGCGCGCGCGACGGGCGACACGTTCGAGCTGACGC
TGCTGCTCGATCGGCACGACGCGGCGCTCGAGAACAGCGTCGATGCGCGGCACCTCGCGTTGAACTGCACGCCGGCCGTC
AACCTGTTCGCGCGGCGCGCGGACCGCATTCCGGTCCATCCGGGCGCGCGCGAGCATCATGTCGTCGTCGATCGCAGCCG
GCCGCTCGACTACGAGGTCTACGCGGTGCGGCGGCTCGCGGGCGAGCAGCGCGACGACGGGCAGATGCGCGCGTTCCGGC
CGTTCCATGCGTCGTTCGCGGGCGACGGCGGCAATTACGGCGCGTACTACACGGTGCGCCGCGAGCCGCGCCTCGTGTCC
GCGCAGGCGCGCGCGAACGGCACGCGCACCGGCTACGTCGGCAGCGAGACGTTCGTGTCGCTCGTCGATAGCGCGTGCGC
GCCGTATGACGAATCGATCCGCTATCTGTCCGTCGACACGCTGTGCACGAACCGCGATCTCGTCCTGCTGTTGCCGGCGG
GCGACGCGAACGCGTTCACGCTGCGCGTGTCGGCGCCCGTCGAGCGGATCGCCATGATCCGCGGGCCGTCGCGGCCGCGC
CCGCCGCTCGCCGACGCGCAGAGCGCGTGGCGGCTCGTGAGCCATCTCGGGCTCGCGCGCCACACGCTGACCGATGTCGA
CGACGAAGAAGGCGCGCGCGTGCTGCGCGAATTGCTCGGTCTGCACGCGGACCCGGCCGATGCGGCGATGCGCCGGCAGA
TCGACGGTGTGCATCGTGTCGCGTTCGCGCCGGTGTTTCGCCGGCTGCCCGCCGCCGGGCCGCTGATGTTCGGGCGCGGC
GTGCAGGTGGACGTGACCGTCGACGATCATGCGTTCTCCGGCGACAGCCCCTATTTGCTCGGCGCGGTGCTCGAGCAGTT
TTTCGCGCGGCACGTGTCGATCAACTCGTTCGCCGAATGCGTGCTGAGCAGCGCGCAGCGCGGCAGGCTCGCGCAATGGC
CGGCGCGCGTCGGCAGGCGGCCCGCGATATGA

Protein sequence :
MDTRLLDYYNRELAYLRELGGEFAQQFPKVAARLRMHESGPPDPYVERLLEGFSFLTARVQLKMDAEFPRFTQALLDAVY
PGYVAPLPSMAIVQFTPMMNEGSLAQGYRLPAGTALRARPAAAEQTACEFRTAHDLTLWPLELAGASVTGAPAYLPRSAT
AARRDVRGALRIRLKARGGAGLAQLPIDRLMFHLAGPERDALHLLELIAGHTIGVVCHDAAQPPRWLHALGAHALAHQGF
DADQALLPDEGRSFHGYRLLREYFAFPARFLFFSIEGLRPALARATGDTFELTLLLDRHDAALENSVDARHLALNCTPAV
NLFARRADRIPVHPGAREHHVVVDRSRPLDYEVYAVRRLAGEQRDDGQMRAFRPFHASFAGDGGNYGAYYTVRREPRLVS
AQARANGTRTGYVGSETFVSLVDSACAPYDESIRYLSVDTLCTNRDLVLLLPAGDANAFTLRVSAPVERIAMIRGPSRPR
PPLADAQSAWRLVSHLGLARHTLTDVDDEEGARVLRELLGLHADPADAAMRRQIDGVHRVAFAPVFRRLPAAGPLMFGRG
VQVDVTVDDHAFSGDSPYLLGAVLEQFFARHVSINSFAECVLSSAQRGRLAQWPARVGRRPAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 2e-123 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSS2096 YP_112095.1 hypothetical protein VFG2074 Protein 3e-135 48