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Name : prpR (BPSS0205) Accession : YP_110225.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Unknown Product : sigma interaction transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 276127 - 278211 bp Length : 2085 bp Strand : - Note : Similar to Burkholderia sacchari PrpR SWALL:Q8VPT1 (EMBL:AY033092) (646 aa) fasta scores: E(): 3.9e-121, 60.78% id in 663 aa, and to Escherichia coli propionate catabolism operon regulatory protein PrpR or b0330 SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fa DNA sequence : ATGAGCACCCTACCCGAAACCGGCGTGCGGCCGCGCGTCTGGGCGGTCGGCATCAGCCGGCTGCGCGCGCTCTTTCGCGA CATCGCCGACGAATACGAAGAACGCGCCGATCTGCGGATCGTCGCGCGCGGCTACGAGGAGGCGATCACGGCGCTCGCGA CGGCGGGCGCCGAGCGCCCCGACGCGATCGTCGCCGCCGGCTCGAACGGCACCTATCTGAAGGCGCGCGTGCGCGTGCCC GTCGTGCTCGTCAATCCGACCGGCTTCGACGTGATGCACGCGCTCGCGCGGGCGCGGCGCGATGCGGGCCGGATCGCGCT CGTCAGCTACGGCGAGACGCCGCCCGAGGTGCGCAGTTTCGCGGCCGCGTACGGGCTCGACGTCGTGTTCGCGTCGTACC AGAGCGCGCAGGAGGCGGACACGCGCGTGCTCGAGATGCGCGAGCGCGGCATCGAGACCGTCGTCGGGCCGGGGCTCGTC ACCGATCTCGCGGCGAACGCCGGGATGGGCGCGGTGTTCGTCTATTCGCACGCGTCGGTGCGCGCCGCCGTGAACACCGC GCTCGAGGTCGCGCACGCGACGCACGCGGAAGCGCTGCGCCGCGAGCGCCTCGACAACCTGCTGCAGCACCTGCGCGACG GCGTGGTGGCGCTCGACCGCGAGGGCCGCATCGAGGCGATCAACGAGCGGCTCGCGCTCGCGCTCGGCGTATCGCCGTCG GCCGCGGTGGGCCGCGCGCTGGACGATCTGACGCCCGAGCTGCGCACGCTGCGCGCGGCCGACGGCGACACGCTCGCGAC GGTGCGCGGCGTGCGCTACGTCGTGCATCGCGGGCCGCTCGCCTCGAGCGGCGGCGCGCCCGGCAGCGTGCTGACGTTCC AGGAATCGCGTGCGGTCGAGCGGCTCGACCGCACGCTGCGCTCGCATCAGCACGCGCAGCAGTTCACCGCGCGCTACCGG CTCGACGACATCGTCGGCACGACGCCCGCGATCGCGTACGCGCGCGACCTCGCGCGGCGCTACGCGAAATCGGACGCGAC CGTGCTGATCCTCGGCGAGAGCGGCACCGGCAAGGAGATGATCGCGCAGAGCCTGCACGCGCTGTCCGCGCGCCGCAAGT ATCCGTTCGTCGCGGTCAACTGCGGCGCGTTTCCGGAATCGCTGCTCGAGAGCGAGCTGTTCGGCTACGAGGAAGGCGCG TTCACCGGCGCGCGGCGCGGCGGCAAGGCGGGGCTGTTCGAGGCCGCGCACCGCGGCACGCTGTTTCTCGACGAGATCGG CGAAATGCCCCCGTCGCTGCAAAGCCGGCTGCTGCGCGTGCTGCAGGAGCGCGAGGTCGTGCGCGTCGGCTCGACCGAGC CGGTTCCGGTCGACATCCGCGTCGTCGCCGCGACGCACCGGCCGCTCTTCGCCGCCGTCGAGGCGGGCACGTTCCGCGCG GATCTCTATTACCGGTTGAACATCCTGAACATCGGGCTGCCGCCGCTGCGCGAGCGCGCGGCCGACATTCCGGCGCTCGC CGCGACGCTGCTCGCGCAGGCCGCGCGCCGCGAGCCGCGGCTCGCCGAGCGGCTGCGCGACGCCAACGATGCGGCGCGCG CGCTCGACGCGGCGAACGCCGCGCTCGCCCGCTATCGATGGCCGGGCAACGTGCGCGAATTGCAGAACGTGATCGAGCGC ATCGCCGTCGAGCTCGCCGACGCGGGCGAGCGCGGCGATGCGGCCGTGAGCGCCGACACGCTGCGCGCGATCGCGCCCGA GGTGTTCGCGCTCGATACGCTCGGCGGGTTCGGCTCGTTCGGCTCGGCGGCGGGCGGCGGCCACGGCGACGCGAGCGGCG GAGATATCGATGCCGATGCCGACGCGCGACGCCCGACGCTCGTGCAGCGCCGCCGGCGCGCGGAAGCCGACGAGATTCGC GCGGCGCTCGACGCATGCGGCGGCGACCGCGACCGCGCGTGCGCGAGGCTCGGCATCAGCAAGACGACGCTGTGGCGCAA GCTCGCGGCGAGCGAAGGGAAAGCGCGAGGCAATAAGCGCGGCGGCGGCCACGGCGGCGACAACGACGAAGGCGCGGGTG CGTGA Protein sequence : MSTLPETGVRPRVWAVGISRLRALFRDIADEYEERADLRIVARGYEEAITALATAGAERPDAIVAAGSNGTYLKARVRVP VVLVNPTGFDVMHALARARRDAGRIALVSYGETPPEVRSFAAAYGLDVVFASYQSAQEADTRVLEMRERGIETVVGPGLV TDLAANAGMGAVFVYSHASVRAAVNTALEVAHATHAEALRRERLDNLLQHLRDGVVALDREGRIEAINERLALALGVSPS AAVGRALDDLTPELRTLRAADGDTLATVRGVRYVVHRGPLASSGGAPGSVLTFQESRAVERLDRTLRSHQHAQQFTARYR LDDIVGTTPAIAYARDLARRYAKSDATVLILGESGTGKEMIAQSLHALSARRKYPFVAVNCGAFPESLLESELFGYEEGA FTGARRGGKAGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVVRVGSTEPVPVDIRVVAATHRPLFAAVEAGTFRA DLYYRLNILNIGLPPLRERAADIPALAATLLAQAARREPRLAERLRDANDAARALDAANAALARYRWPGNVRELQNVIER IAVELADAGERGDAAVSADTLRAIAPEVFALDTLGGFGSFGSAAGGGHGDASGGDIDADADARRPTLVQRRRRAEADEIR AALDACGGDRDRACARLGISKTTLWRKLAASEGKARGNKRGGGHGGDNDEGAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 1e-83 | 42 |
