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Name : BPSS1621 (BPSS1621) Accession : YP_111629.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 2196386 - 2197468 bp Length : 1083 bp Strand : - Note : Similar to Burkholderia pseudomallei SctU SWALL:Q93KZ2 (EMBL:AF074878) (351 aa) fasta scores: E(): 7.7e-60, 47.85% id in 349 aa, and to Ralstonia solanacearum hypersensitivity response secretion protein HrcU or HrpN or rsp0864 or rs01635 SWALL:HRCU_RALSO DNA sequence : ATGGCCGAAGAGAAAACCGAAGAGCCCACCGAGAAGAAGCTGAAGAAGGTGCGCGAGAAGGGCCAGGTCGCCAAGAGCAA GGACATCGCCGACGCGATGACGCTCGCGGCCGCGATCGGCGTGCTCACGGCGTGCGAATCGATGCTCACGGGCGGCCTCT CGCGCGCGGTTCGCACCGCGCTCGACTTCGTGCGCGGCGAGCGCACCCCGCAGGCGACGCTCGCCGCGCTGCACGATCTC GCCGCGAGCGCCGCGCTGACGATGCTGCCGTTCGTCGCCGCCGCGATCGTCGCGGGCATCGTGTCGCAGGCGCCGCAGGC GGGCTTCCTGATCACGCTCGAGCCCGTGATGCCGAAGTTCGACGCGATCAATCCGATGGCGGGCATCAAGCGGATCTTCT CGCTGAAGTCGCTGCTCGAGCTCGTGAAGATGATCGTCAAGGCGCTCGTGCTCGCGTGCGTGGCATGGAAGATGATGACC TCGCTGTTTCCGCTCGTCGTCGCGAGCGTGTACGAAGCGACGCCGCAGCTCGCGCGCGTGCTGTGGACGGTGCTGATGAA GCTGCTCGGCACCGTGTCGGTCGTCGTCGCGGTGCTCGCGGCGGCCGATTACAAGATCGCACGCGTGATGTTCGTTCGCG AGAACCGGATGACGAAGGAGGAAGTCAAGCGCGAGCACAAGGAGAGCGACGGCGATCCGCACACGAAGGGCGAGCGCCGC CGGCTCGCGCGCGAGATCGCGACGAGCGCGCCGCCGCGGCAGCGGGTCGGCCAGGCGAACGTGCTCGTCGTCAACCCGAC GCACTACGCGGTCGCGATCCGCTATGCGCCCGACGAGCATCCGCTGCCGCGGGTCATCGAGAAGGCCGTCGACGACGGCG CGCTCGCGCTGCGCCGCCACGCGCACGCGCTCGGCGTGCCGATCGTCGGCAATCCGAGCGTCGCGCGCGCGCTGTACCGC GTCGAGCGCGACGCGTCGATTCCCGAAGAGCTGTTCGAGACGGTGGCCGCGATCCTGCGCTGGGTCGAGTCCCTCTCGGC CGCGCGCGCGGTCGCCGCCGTTTCCTCCGCGAGGTCGTCATGA Protein sequence : MAEEKTEEPTEKKLKKVREKGQVAKSKDIADAMTLAAAIGVLTACESMLTGGLSRAVRTALDFVRGERTPQATLAALHDL AASAALTMLPFVAAAIVAGIVSQAPQAGFLITLEPVMPKFDAINPMAGIKRIFSLKSLLELVKMIVKALVLACVAWKMMT SLFPLVVASVYEATPQLARVLWTVLMKLLGTVSVVVAVLAAADYKIARVMFVRENRMTKEEVKREHKESDGDPHTKGERR RLAREIATSAPPRQRVGQANVLVVNPTHYAVAIRYAPDEHPLPRVIEKAVDDGALALRRHAHALGVPIVGNPSVARALYR VERDASIPEELFETVAAILRWVESLSAARAVAAVSSARSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-58 | 44 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-61 | 44 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-60 | 44 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-53 | 43 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-53 | 43 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 6e-56 | 43 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 5e-58 | 42 |
