Gene Information

Name : BPSS1611 (BPSS1611)
Accession : YP_111619.1
Strain :
Genome accession: NC_006351
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2188230 - 2188685 bp
Length : 456 bp
Strand : -
Note : Similar to Xanthomonas campestris HpaB SWALL:Q9WWG3 (EMBL:AF056246) (162 aa) fasta scores: E(): 2e-29, 53.84% id in 156 aa, and to Burkholderia pseudomallei hypothetical 16.8 kDa protein SWALL:Q93KY8 (EMBL:AF074878) (151 aa) fasta scores: E(): 2e-41, 68%

DNA sequence :
ATGAGTTGGGAACGTTATGCGCAGGTCGTCGCGCAGGTGTGCGCGGTCGTCGATTTGCCGGACGTCGATTACGTACTCGA
GACGCGCACGATCGACGTCGAGGGCTTCGACGTGCGCATCGAGTATTTCGACGACGACCCGGAATCGATGTACGTGAATT
TCCATTACGGCATCGTCAGCGCGGGCCGCACGCTTACCGTGTATCGGCTGCTGCTCGAGGCGAACCTGCTGATCTATGCG
CAGGACCAGGCGCAACTCGGGATCGACGCGGACACGGGCAGCATCGTGCTGCTGATGCGCCTGCCGCTCACGCCGGACGT
GACGGGCGAGACGGTGGCCGATCTGTTCGCGCACTACGCGGAGCACGGCCGCTACTGGCGGCAGAACATCATCGAATCGG
GCGACGAGATGTTCGACGCAATCGCGTCCGGCGAATATTTCTGGCTGCGGGTGTAG

Protein sequence :
MSWERYAQVVAQVCAVVDLPDVDYVLETRTIDVEGFDVRIEYFDDDPESMYVNFHYGIVSAGRTLTVYRLLLEANLLIYA
QDQAQLGIDADTGSIVLLMRLPLTPDVTGETVADLFAHYAEHGRYWRQNIIESGDEMFDAIASGEYFWLRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaB YP_198714.1 protein HpaB Virulence Hrp PAI Protein 1e-30 54
XC_3022 YP_244090.1 HpaB protein Virulence Hrp PAI Protein 3e-30 54
hpaB NP_636594.1 HpaB protein Virulence Hrp PAI Protein 3e-30 54
hpaB NP_640751.1 HpaB protein Virulence Hrp PAI Protein 1e-30 54
hpaB YP_362147.1 HpaB protein Virulence Hrp PAI Protein 7e-31 54
hpaB AAP34355.1 HpaB Virulence Hrp PAI Protein 1e-30 54
hpaB BAB07868.1 HpaB Virulence Hrp PAI Protein 6e-31 54
hpaB AAD21328.1 HpaB Virulence Hrp PAI Protein 4e-31 54