Gene Information

Name : BPSS1548 (BPSS1548)
Accession : YP_111554.1
Strain :
Genome accession: NC_006351
Putative virulence/resistance : Virulence
Product : Type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2103000 - 2103269 bp
Length : 270 bp
Strand : +
Note : Similar to Salmonella typhimurium PrgI protein or stm2873 SWALL:PRGI_SALTY (SWALL:P41784) (80 aa) fasta scores: E(): 4.2e-12, 55.26% id in 76 aa, and to Shigella flexneri, and Shigella sonnei MxiH protein or cp0137 SWALL:MXIH_SHIFL (SWALL:Q06079) (83 aa)

DNA sequence : 
ATGAGCAATCCCCCGACCCCGCTGCTGGCCGACTACGAGTGGTCAGGCTACCTGACCGGCATCGGCCGCGCGTTCGACGA
CGGCGTGAAGGATCTGAACAAGCAGTTGCAGGACGCCCAGGCGAACCTCACGAAAAACCCGAGCGATCCGACCGCGCTCG
CCAACTATCAGATGATCATGTCCGAATACAACCTGTACCGGAACGCGCAGAGCAGCGCGGTCAAATCGATGAAGGACATC
GATTCGTCGATCGTCTCGAACTTCCGCTAA

Protein sequence : 
MSNPPTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDI
DSSIVSNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 5e-17 56
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 5e-17 56
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 4e-17 56
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 4e-17 56
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 3e-17 56
ECs3718 NP_311745.1 EprI Not tested LIM Protein 1e-17 55
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 1e-14 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSS1548 YP_111554.1 Type III secretion system protein VFG2466 Protein 5e-36 100
BPSS1548 YP_111554.1 Type III secretion system protein VFG0535 Protein 1e-17 56
BPSS1548 YP_111554.1 Type III secretion system protein VFG0996 Protein 4e-15 50