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Name : bicA (BPSS1533) Accession : YP_111539.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein Function : - COG functional category : S : Function unknown COG ID : COG1729 EC number : - Position : 2087441 - 2087956 bp Length : 516 bp Strand : - Note : Similar to Salmonella typhimurium, Salmonella typhi, and Salmonella dublin surface presentation of antigens protein SpaT or SicA or stm2886 or sty3009 SWALL:SPAT_SALTY (SWALL:P40703) (165 aa) fasta scores: E(): 4.2e-37, 61.9% id in 147 aa, and to Shigella DNA sequence : ATGACGCAACGCGACGTGAACATAGACGACATCGAGGCGCAGGAAATGGCGGCGGCGCTGCTGGACGCGGTCCAGAACGG CGCGACGCTGAAGGACCTGCATCAGGTGCCGCAGGACCTGATGGACGGCATCTATGCGTTCGCGTACCGCTTCTACCAGC AGGGGCGGCTCGACGACGCGGAGGTGTTCTTCCGCTTTCTGTGCATCTACGACTTCTACAACGCCGAATACGCGATGGGG CTCGCGGCGGTGTGCCAGTTGAAGAAGGAGTACGCGCGGGCGATCGATCTGTATGCACTCGCGTATTCGCTGTCGAAGGA CGACCACCGGCCGATGTTCCACACCGGCCAATGCCATCTGCTGATGGGCAAGGCGGCGCTCGCGCGGCGCTGCTTCGGCA TCGTCGTCGAGCGCTCGCGCGACGAGCGCCTCGCGCAGAAGGCGCAGTCCTATCTCGACGGGCTCGACGAAGTGGGCGCC GACGCGGCGCCCGCATCCGCCGGGAACGACCACTAG Protein sequence : MTQRDVNIDDIEAQEMAAALLDAVQNGATLKDLHQVPQDLMDGIYAFAYRFYQQGRLDDAEVFFRFLCIYDFYNAEYAMG LAAVCQLKKEYARAIDLYALAYSLSKDDHRPMFHTGQCHLLMGKAALARRCFGIVVERSRDERLAQKAQSYLDGLDEVGA DAAPASAGNDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 9e-38 | 62 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 2e-45 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| bicA | YP_111539.1 | surface presentation of antigens protein | VFG2451 | Protein | 2e-76 | 100 |
| bicA | YP_111539.1 | surface presentation of antigens protein | VFG0547 | Protein | 7e-46 | 60 |
| bicA | YP_111539.1 | surface presentation of antigens protein | VFG0988 | Protein | 6e-44 | 51 |
| bicA | YP_111539.1 | surface presentation of antigens protein | VFG1769 | Protein | 1e-38 | 47 |
