|
Name : BPSS1426 (BPSS1426) Accession : YP_111438.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Unknown Product : glycine betaine/L-proline transport ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 1940250 - 1941419 bp Length : 1170 bp Strand : - Note : Similar to Salmonella typhimurium glycine betaine/L-proline transport ATP-binding protein ProV or stm2809 SWALL:PROV_SALTY (SWALL:P17328) (400 aa) fasta scores: E(): 2.3e-57, 46.73% id in 398 aa, and to Ralstonia solanacearum glycine betaine/L-proline ATP DNA sequence : ATGGATGCCCCGAAGGTCGTAGTCGAAGGTCTGTGCAAGGTGTTTGGAAGCAATCCGCGGCAAGCGCTGGACATGCTCGC CGCAGGCGCGACGAAGGATGAAGTGTTCGCGCGCACGGGCCAGGTGGTCGGCGTGCACAACGTGTCGTTCGATGTGCGGG AAGGCGAGATTTTCGTGCTGATGGGGCTCTCCGGCTCCGGCAAGTCGACGCTGATCCGGCTCGTCAACCGGCTCGTCGAG CCGAGCGCCGGCAAGGTGATGATCGACGGGCGCGACGTCGCCGCGGTGCGCCGCGCCGAGCTGACCGCGCTGCGCCGCAC CGACATGAGCATGGTGTTCCAGTCGTTCGCGCTGATGCCGCAGCGCACGGTGCTGTCGAACGCCGCGTTCGGCCTCGAAG TGGCCGGCATGGGCCGCAAGGATCGCGAGCGGCGCGCGATGGACGTGCTCGAGCAGGTGGGCCTCGCGCAGTTCGCGCAC AAGCTGCCCGCCGAACTCTCGGGCGGCATGCAGCAGCGCGTCGGCCTCGCGCGCGCGCTCGCGGTGAACCCGTCGCTGAT GATCATGGACGAGGCGTTCTCCGCGCTCGATCCGTTAAAGCGCAAGGAAATGCAGAACGTGCTGCTGCAGCTTCAGAAAG AGCAGCGCCGCACGATCATGTTCGTGTCGCACGATCTCGAGGAGGCGCTGCGCATCGGCAGCCGGATCGCGATCATGGAG GGCGGCCGGCTCGTGCAGGTCGGCACGCCGCAGGAAATCATCGCGAACCCCGCCGACGACTACGTGCGCGCGTTCTTCGA AGGCATCGACACGAGCCGCTACCTGACCGCGGGCGACCTGATGCTCACGGGCGCCGTGCCGACCCTGTCGAAGCTCGATG CGAAGCACGTCGCCGCTTCGCTGAACGGCAGCGCCGAATACGCGTTCGTGCTCGACGAGGCGCGCAAGATCCGCGGCTTC GTCACGCGCGACGCGCTGAACGGCGCGACGCCGAACGTGCGCCAGGTCGAAAGCATTCCGCGCGACGCATCGCTCGATCA CGTCGTCGAGCGATGCGTCGCGCATCCGCACGCGCTGCCCGTCGTCGACGACGACGGCTGTTACTGCGGCTCGGTCGACC GGGCCGTGCTTCTGAAAGCCATTACGCGTTCACGAGGTTCCCATGTCTGA Protein sequence : MDAPKVVVEGLCKVFGSNPRQALDMLAAGATKDEVFARTGQVVGVHNVSFDVREGEIFVLMGLSGSGKSTLIRLVNRLVE PSAGKVMIDGRDVAAVRRAELTALRRTDMSMVFQSFALMPQRTVLSNAAFGLEVAGMGRKDRERRAMDVLEQVGLAQFAH KLPAELSGGMQQRVGLARALAVNPSLMIMDEAFSALDPLKRKEMQNVLLQLQKEQRRTIMFVSHDLEEALRIGSRIAIME GGRLVQVGTPQEIIANPADDYVRAFFEGIDTSRYLTAGDLMLTGAVPTLSKLDAKHVAASLNGSAEYAFVLDEARKIRGF VTRDALNGATPNVRQVESIPRDASLDHVVERCVAHPHALPVVDDDGCYCGSVDRAVLLKAITRSRGSHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 9e-83 | 45 |
