|
Name : xerD (BPSL0863) Accession : YP_107488.2 Strain : Genome accession: NC_006350 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1002975 - 1003892 bp Length : 918 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : GTGGACGCGCTTGCCGCGTCGCCGGCGTGGCTCGACAGCCGCGCGTCGATCGATCTGTTCTGCGACGCGATGTGGCTCGA GCACGGGCTGTCGCGCAACACGCTCGACGCGTACCGGCGTGATCTGCAACTGTTCGCGCAATGGCTCGCCGCGCGGCATG CGGCGAGCGTCGATCATGCGAGCGAGCCGACGCTGACCGAATACATCGCCGCGCGCAGCGACGGCAAGGCGACGTCGTCG AATCGCCGGCTATCGGTGTTTCGCCGCTACTACGGCTGGGCGGTGCGCGAGCACCGCGCGGCCGTCGATCCGACGCTCAG GATCGCGTCGGCGAAGCAGGCGCCGAGGTTTCCGTCGACGCTGTCCGAGGCGCAGGTCGAGGCGCTTCTCGCCGCGCCCG ACGTCGATACGCCGCTCGGCCTGCGCGACCGCACGATGCTCGAACTGATGTATGCGAGCGGGTTGCGCGTGAGCGAGCTC GTCACGCTGAAGACGGTCGAGGTCGGATTGAACGAAGGCGTGGTGCGCGTGACGGGCAAGGGTTCGAAAGAGCGGCTCGT GCCGTTCGGCGAAGTCGCGCACGGCTGGATCGAGCGCTATCTGCGCGATGCACGGCCCGCGCTACTCGGTGCGCGCGCGG CGGATGCGCTGTTCGTCACCGCACGCGGCGACGGCATGACGCGCCAGCAATTCTGGAACATCATCAAGCGCCATGCGCAG CAGGCGGATGTTCGCGTGCATCTGTCGCCGCATACGCTGCGGCACGCGTTCGCGACGCATCTGCTCAATCACGGCGCGGA CCTGCGGGTCGTGCAACTGCTGCTCGGCCATAGCGATATCTCGACGACGCAGATCTACACGCACGTCGCGCGCGAGCGGC TGAAGACGCTGCATGCGGCGCATCATCCGCGCGGATGA Protein sequence : MDALAASPAWLDSRASIDLFCDAMWLEHGLSRNTLDAYRRDLQLFAQWLAARHAASVDHASEPTLTEYIAARSDGKATSS NRRLSVFRRYYGWAVREHRAAVDPTLRIASAKQAPRFPSTLSEAQVEALLAAPDVDTPLGLRDRTMLELMYASGLRVSEL VTLKTVEVGLNEGVVRVTGKGSKERLVPFGEVAHGWIERYLRDARPALLGARAADALFVTARGDGMTRQQFWNIIKRHAQ QADVRVHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKTLHAAHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-59 | 55 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-59 | 55 |
